Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim50Q810I2 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim50Q810I2 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
Trim50Q810I2 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Raver2-201ENSMUST00000038463 4045 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim50Q810I2 Btbd11-203ENSMUST00000105307 5788 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
Trim50Q810I2 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Gm7712-202ENSMUST00000222331 1510 ntBASIC16.77■□□□□ 0.28
Trim50Q810I2 Lrrc14-204ENSMUST00000137649 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim50Q810I2 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
Trim50Q810I2 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim50Q810I2 Gm9694-201ENSMUST00000193347 1189 ntBASIC16.77■□□□□ 0.28
Trim50Q810I2 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC16.77■□□□□ 0.28
Trim50Q810I2 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim50Q810I2 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim50Q810I2 Gm26884-201ENSMUST00000181207 3074 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim50Q810I2 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim50Q810I2 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim50Q810I2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Deaf1-209ENSMUST00000211537 2882 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Bcr-201ENSMUST00000164107 6839 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Gm24841-201ENSMUST00000158676 357 ntBASIC16.76■□□□□ 0.27
Trim50Q810I2 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Inppl1-201ENSMUST00000035836 4995 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Rasl10b-202ENSMUST00000108140 3156 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC16.76■□□□□ 0.27
Trim50Q810I2 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
Trim50Q810I2 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Rbpms-213ENSMUST00000191473 2547 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Gm15556-201ENSMUST00000122904 663 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Gm16042-201ENSMUST00000204813 1247 ntBASIC16.75■□□□□ 0.27
Trim50Q810I2 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.75■□□□□ 0.27
Trim50Q810I2 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Tmem239-201ENSMUST00000055421 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.75■□□□□ 0.27
Trim50Q810I2 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
Trim50Q810I2 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Trim50Q810I2 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim50Q810I2 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gm715-201ENSMUST00000117865 831 ntBASIC16.74■□□□□ 0.27
Trim50Q810I2 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gm11273-201ENSMUST00000044043 390 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
Trim50Q810I2 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Trim50Q810I2 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Trim50Q810I2 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Trim50Q810I2 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC16.73■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms