Protein–RNA interactions for Protein: Q80Z38

Shank2, SH3 and multiple ankyrin repeat domains protein 2, mousemouse

Predictions only

Length 1,476 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank2Q80Z38 Rhd-201ENSMUST00000030627 1514 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Gm19721-201ENSMUST00000195284 1764 ntBASIC22.22■■□□□ 1.15
Shank2Q80Z38 Clcc1-203ENSMUST00000106613 3064 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Shank2Q80Z38 Trmt11-201ENSMUST00000019927 2359 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Otud1-201ENSMUST00000052168 2832 ntAPPRIS P1 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Chka-201ENSMUST00000025760 2319 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Nudt19-201ENSMUST00000040962 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Gm15467-201ENSMUST00000120582 445 ntBASIC22.21■■□□□ 1.15
Shank2Q80Z38 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Gm6736-201ENSMUST00000166583 948 ntBASIC22.21■■□□□ 1.15
Shank2Q80Z38 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
Shank2Q80Z38 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 CT943659.1-201ENSMUST00000215459 326 ntBASIC22.21■■□□□ 1.15
Shank2Q80Z38 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Cyb5r4-201ENSMUST00000168529 2644 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Shank2Q80Z38 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.15
Shank2Q80Z38 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Sh2b3-203ENSMUST00000118580 2393 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Iqck-206ENSMUST00000208658 2891 ntBASIC22.2■■□□□ 1.14
Shank2Q80Z38 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Gm27867-201ENSMUST00000184778 125 ntBASIC22.2■■□□□ 1.14
Shank2Q80Z38 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Psmb5-202ENSMUST00000227257 622 ntBASIC22.2■■□□□ 1.14
Shank2Q80Z38 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Gfra1-208ENSMUST00000152507 1937 ntAPPRIS P1 TSL 5 BASIC22.2■■□□□ 1.14
Shank2Q80Z38 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Cdca4-202ENSMUST00000220899 1994 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Gm15165-201ENSMUST00000118140 502 ntBASIC22.19■■□□□ 1.14
Shank2Q80Z38 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Def6-201ENSMUST00000002327 2277 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Dnaja4-202ENSMUST00000120452 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Shank2Q80Z38 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Fam83d-201ENSMUST00000029183 2266 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Gm2756-201ENSMUST00000195851 400 ntBASIC22.18■■□□□ 1.14
Shank2Q80Z38 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Fhl3-201ENSMUST00000038684 1664 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Hoxd3-201ENSMUST00000047830 2292 ntAPPRIS P1 TSL 5 BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Il17re-205ENSMUST00000203661 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Azi2-207ENSMUST00000134433 2499 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Shank2Q80Z38 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
Shank2Q80Z38 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
Shank2Q80Z38 Gm43272-201ENSMUST00000200599 1584 ntBASIC22.16■■□□□ 1.14
Shank2Q80Z38 Kcnc3-207ENSMUST00000209177 2960 ntAPPRIS ALT2 TSL 5 BASIC22.16■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 24.2 ms