Protein–RNA interactions for Protein: Q80XJ3

Ttc28, Tetratricopeptide repeat protein 28, mousemouse

Predictions only

Length 2,450 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc28Q80XJ3 Gm44359-201ENSMUST00000200671 138 ntBASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Surf4-201ENSMUST00000015011 3281 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Fbxl5-201ENSMUST00000047857 2858 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Ttc28Q80XJ3 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Auts2-212ENSMUST00000178555 309 ntBASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Gabra4-205ENSMUST00000199357 2407 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Gm12644-201ENSMUST00000119935 606 ntBASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 5730507C01Rik-202ENSMUST00000177778 2542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Tada2b-201ENSMUST00000031097 3791 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Ttc28Q80XJ3 Tmem164-206ENSMUST00000112896 5224 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Gm11594-201ENSMUST00000122313 162 ntBASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Pxk-201ENSMUST00000036682 2812 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 4930447C04Rik-201ENSMUST00000044000 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Yipf2-203ENSMUST00000180365 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Ttc28Q80XJ3 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Zcchc14-201ENSMUST00000046386 7444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Ttc28Q80XJ3 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Gm10052-201ENSMUST00000168019 960 ntBASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Gm7729-201ENSMUST00000050143 801 ntBASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 AC108846.1-201ENSMUST00000214531 513 ntBASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Usf2-201ENSMUST00000058860 2419 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Strn3-201ENSMUST00000013130 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Ttc28Q80XJ3 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ttc28Q80XJ3 Gm7935-201ENSMUST00000100555 1278 ntBASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 20 ms