Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Vrk1Q80X41 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Cckbr-201ENSMUST00000033189 2573 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC16.41■□□□□ 0.22
Vrk1Q80X41 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Trim44-201ENSMUST00000102573 5612 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Eif4g3-202ENSMUST00000084214 6139 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 AC159205.3-201ENSMUST00000224614 874 ntBASIC16.4■□□□□ 0.22
Vrk1Q80X41 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
Vrk1Q80X41 Trim63-202ENSMUST00000105875 1886 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.22
Vrk1Q80X41 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 AC123834.2-201ENSMUST00000224038 2340 ntBASIC16.39■□□□□ 0.21
Vrk1Q80X41 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC16.39■□□□□ 0.21
Vrk1Q80X41 Gm29518-201ENSMUST00000190858 372 ntBASIC16.39■□□□□ 0.21
Vrk1Q80X41 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Pip5k1c-202ENSMUST00000105327 2551 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
Vrk1Q80X41 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Ptpre-201ENSMUST00000073961 5410 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Cyth2-202ENSMUST00000107729 2519 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm11355-201ENSMUST00000121120 306 ntBASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Fst-202ENSMUST00000223640 2612 ntBASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm42939-201ENSMUST00000197514 2205 ntBASIC16.38■□□□□ 0.21
Vrk1Q80X41 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Sox30-201ENSMUST00000049038 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
Vrk1Q80X41 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Trnt1-202ENSMUST00000113247 1934 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 2310022A10Rik-201ENSMUST00000067386 2701 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC16.37■□□□□ 0.21
Vrk1Q80X41 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 76,532 protein–RNA pairs in 92.3 ms