Protein–RNA interactions for Protein: Q80WG7

Trim36, E3 ubiquitin-protein ligase Trim36, mousemouse

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim36Q80WG7 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.63■□□□□ 0.25
Trim36Q80WG7 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 Idnk-204ENSMUST00000226010 1898 ntBASIC16.63■□□□□ 0.25
Trim36Q80WG7 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Trim36Q80WG7 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Gm5643-201ENSMUST00000117081 966 ntBASIC16.62■□□□□ 0.25
Trim36Q80WG7 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Trim36Q80WG7 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Gm11249-201ENSMUST00000117071 859 ntBASIC16.61■□□□□ 0.25
Trim36Q80WG7 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Trim36Q80WG7 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Selenos-201ENSMUST00000101801 1191 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.6■□□□□ 0.25
Trim36Q80WG7 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC16.6■□□□□ 0.25
Trim36Q80WG7 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Cops9-201ENSMUST00000097642 438 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Gm19531-201ENSMUST00000216737 1377 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Trim36Q80WG7 Gm37519-201ENSMUST00000191687 2210 ntBASIC16.6■□□□□ 0.25
Trim36Q80WG7 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Trim36Q80WG7 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC16.59■□□□□ 0.25
Trim36Q80WG7 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
Trim36Q80WG7 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.58■□□□□ 0.25
Trim36Q80WG7 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC16.58■□□□□ 0.25
Trim36Q80WG7 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC16.58■□□□□ 0.24
Trim36Q80WG7 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Trim36Q80WG7 Gm11527-201ENSMUST00000153795 596 ntTSL 2 BASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms