Protein–RNA interactions for Protein: Q80VA5

Sh3tc2, SH3 domain and tetratricopeptide repeat-containing protein 2, mousemouse

Predictions only

Length 1,289 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3tc2Q80VA5 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Gm18669-201ENSMUST00000216049 778 ntBASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Gm10461-201ENSMUST00000202073 4786 ntBASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Sh3tc2Q80VA5 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Zfp282-201ENSMUST00000061890 5573 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Letm1-201ENSMUST00000005431 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Gm7153-201ENSMUST00000117092 455 ntBASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Mir1668-201ENSMUST00000184114 107 ntBASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Umpk-ps-201ENSMUST00000211897 827 ntBASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Zfp800-203ENSMUST00000115321 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Sh3tc2Q80VA5 Tgds-204ENSMUST00000228543 1594 ntBASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 U2af2-202ENSMUST00000165399 1810 ntTSL 5 BASIC18.72■□□□□ 0.59
Sh3tc2Q80VA5 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Gm5828-201ENSMUST00000071842 1860 ntBASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Gm7213-201ENSMUST00000215977 950 ntBASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Snhg10-202ENSMUST00000222812 527 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
Sh3tc2Q80VA5 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Rsph6a-201ENSMUST00000035521 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Bsg-202ENSMUST00000105381 1240 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Pym1-202ENSMUST00000163377 1158 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Gm44771-201ENSMUST00000206975 626 ntBASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
Sh3tc2Q80VA5 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Abhd5-202ENSMUST00000111497 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
Sh3tc2Q80VA5 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Rd3-201ENSMUST00000175680 1969 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Rpp25-201ENSMUST00000080514 1423 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
Sh3tc2Q80VA5 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
Retrieved 100 of 76,532 protein–RNA pairs in 17.7 ms