Protein–RNA interactions for Protein: Q80TE0

Rpap1, RNA polymerase II-associated protein 1, mousemouse

Predictions only

Length 1,409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap1Q80TE0 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Ndufaf8-202ENSMUST00000185558 427 ntTSL 5 BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Gm38342-201ENSMUST00000195710 2980 ntBASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
Rpap1Q80TE0 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Gm28402-201ENSMUST00000188574 373 ntTSL 3 BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Zfp385b-204ENSMUST00000111831 2734 ntAPPRIS P3 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Phf7-203ENSMUST00000226565 1971 ntBASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Fkbp14-202ENSMUST00000117375 1830 ntTSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
Rpap1Q80TE0 Nr2f1-201ENSMUST00000091458 3207 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Tsen15-201ENSMUST00000015124 1133 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Tbc1d2b-201ENSMUST00000041767 5956 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 G730003C15Rik-202ENSMUST00000189096 2309 ntBASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
Rpap1Q80TE0 Gm44450-201ENSMUST00000199528 114 ntBASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Gm18195-201ENSMUST00000207604 706 ntBASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 AC132104.2-201ENSMUST00000215011 266 ntBASIC26.65■■□□□ 1.86
Rpap1Q80TE0 AC161829.1-201ENSMUST00000220298 281 ntBASIC26.65■■□□□ 1.86
Rpap1Q80TE0 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Kcnip2-209ENSMUST00000162528 2395 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Cep57-209ENSMUST00000148086 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Gm9449-201ENSMUST00000207265 1011 ntBASIC26.65■■□□□ 1.86
Rpap1Q80TE0 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC26.65■■□□□ 1.86
Rpap1Q80TE0 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Pcbp4-201ENSMUST00000024260 2035 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Lrrc43-201ENSMUST00000094327 2046 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
Rpap1Q80TE0 Pcnp-202ENSMUST00000114444 2295 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rpap1Q80TE0 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rpap1Q80TE0 Gm2651-201ENSMUST00000203560 838 ntBASIC26.64■■□□□ 1.85
Rpap1Q80TE0 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rpap1Q80TE0 Tmie-201ENSMUST00000050958 2802 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
Rpap1Q80TE0 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Pptc7-201ENSMUST00000053426 4644 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm12644-201ENSMUST00000119935 606 ntBASIC26.63■■□□□ 1.85
Rpap1Q80TE0 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
Rpap1Q80TE0 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Rab3ip-201ENSMUST00000020375 2690 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Gm37935-201ENSMUST00000192012 982 ntBASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Rps4l-201ENSMUST00000071745 943 ntBASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
Rpap1Q80TE0 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Arhgap23-202ENSMUST00000107601 5450 ntTSL 5 BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC26.61■■□□□ 1.85
Rpap1Q80TE0 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
Rpap1Q80TE0 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC26.6■■□□□ 1.85
Retrieved 100 of 76,532 protein–RNA pairs in 108 ms