Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Ush1gQ80T11 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1gQ80T11 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC18.83■□□□□ 0.61
Ush1gQ80T11 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1gQ80T11 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
Ush1gQ80T11 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Gm27704-201ENSMUST00000185094 107 ntBASIC18.83■□□□□ 0.6
Ush1gQ80T11 Gm7791-201ENSMUST00000219066 539 ntBASIC18.83■□□□□ 0.6
Ush1gQ80T11 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Itsn1-205ENSMUST00000113996 5147 ntTSL 5 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.6
Ush1gQ80T11 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Gm24841-201ENSMUST00000158676 357 ntBASIC18.82■□□□□ 0.6
Ush1gQ80T11 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Mir1668-201ENSMUST00000184114 107 ntBASIC18.82■□□□□ 0.6
Ush1gQ80T11 Krtcap3-201ENSMUST00000054829 904 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Rragd-201ENSMUST00000029946 5055 ntTSL 5 BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Khdrbs2-201ENSMUST00000027226 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Tmem136-202ENSMUST00000213544 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Ush1gQ80T11 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
Ush1gQ80T11 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Gm17971-201ENSMUST00000190239 806 ntBASIC18.8■□□□□ 0.6
Ush1gQ80T11 Znhit1-202ENSMUST00000085941 740 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
Ush1gQ80T11 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Scrib-202ENSMUST00000063747 5440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Kiss1r-202ENSMUST00000219745 979 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Atp2a2-201ENSMUST00000031423 4486 ntAPPRIS P4 TSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Ush1gQ80T11 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.78■□□□□ 0.6
Ush1gQ80T11 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Mir8112-201ENSMUST00000184382 131 ntBASIC18.78■□□□□ 0.6
Ush1gQ80T11 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Nin-203ENSMUST00000095666 7183 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Ush1gQ80T11 Zfp219-204ENSMUST00000226522 2804 ntAPPRIS P2 BASIC18.78■□□□□ 0.6
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms