Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rfx4Q7TNK1 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Smad3-201ENSMUST00000034973 5090 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Psen2-205ENSMUST00000111108 1997 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Letm1-203ENSMUST00000148451 2478 ntTSL 2 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Gm21168-201ENSMUST00000199646 1096 ntBASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Gm34933-201ENSMUST00000203245 1067 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rfx4Q7TNK1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Opn4-202ENSMUST00000168444 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 a-201ENSMUST00000029123 731 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rfx4Q7TNK1 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Rab7-202ENSMUST00000113596 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Gm13790-201ENSMUST00000156209 473 ntTSL 3 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 4930518J20Rik-201ENSMUST00000195064 1478 ntBASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Bicdl1-201ENSMUST00000055408 3026 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rfx4Q7TNK1 Phax-202ENSMUST00000130163 1386 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Rex1bd-206ENSMUST00000136913 671 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Gm6420-201ENSMUST00000193885 723 ntBASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rfx4Q7TNK1 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx4Q7TNK1 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC16.52■□□□□ 0.23
Rfx4Q7TNK1 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rfx4Q7TNK1 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.23
Rfx4Q7TNK1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Nespas-201ENSMUST00000143738 1083 ntBASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Ypel3-210ENSMUST00000170882 1050 ntAPPRIS P1 TSL 3 BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rfx4Q7TNK1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx4Q7TNK1 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx4Q7TNK1 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Rfx4Q7TNK1 Rfx7-202ENSMUST00000163401 7880 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
Rfx4Q7TNK1 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms