Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Slc23a4-205ENSMUST00000201355 2003 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 2210408F21Rik-211ENSMUST00000151800 750 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Gm30025-201ENSMUST00000218555 728 ntBASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Il3ra-202ENSMUST00000223589 738 ntBASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.41■□□□□ 0.54
Rnf139Q7TMV1 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Ssfa2-203ENSMUST00000111788 4976 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 2210408F21Rik-204ENSMUST00000136571 478 ntTSL 3 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Gm8994-201ENSMUST00000077886 1236 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Gm6598-201ENSMUST00000202719 2615 ntBASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Med18-201ENSMUST00000102567 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Rnf139Q7TMV1 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
Rnf139Q7TMV1 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Gm27463-201ENSMUST00000183569 57 ntBASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Mir6982-201ENSMUST00000184354 68 ntBASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
Rnf139Q7TMV1 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Zxdc-203ENSMUST00000113539 4864 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Lats2-201ENSMUST00000022531 5191 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Npm3-ps1-201ENSMUST00000119728 528 ntBASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Gm43353-201ENSMUST00000199224 1295 ntBASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 AC120002.2-201ENSMUST00000220205 773 ntBASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Npm3-201ENSMUST00000070215 888 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Gm16499-203ENSMUST00000204633 2177 ntBASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC18.38■□□□□ 0.53
Rnf139Q7TMV1 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Calu-208ENSMUST00000173694 611 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Trim24-201ENSMUST00000031859 4042 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Mark3-202ENSMUST00000084953 3365 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
Rnf139Q7TMV1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Pdcd5-202ENSMUST00000120714 767 ntTSL 3 BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Rnf139Q7TMV1 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 57.2 ms