Protein–RNA interactions for Protein: Q78T54

Vma21, Vacuolar ATPase assembly integral membrane protein Vma21, mousemouse

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vma21Q78T54 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Gm43272-201ENSMUST00000200599 1584 ntBASIC14.05□□□□□ -0.16
Vma21Q78T54 Gm37820-201ENSMUST00000194021 2147 ntBASIC14.05□□□□□ -0.16
Vma21Q78T54 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Gm44899-202ENSMUST00000209433 511 ntTSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Arl10-201ENSMUST00000026988 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Plbd2-201ENSMUST00000031597 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Vma21Q78T54 Sox1ot-201ENSMUST00000080795 5064 ntTSL 5 BASIC14.05□□□□□ -0.16
Vma21Q78T54 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.04□□□□□ -0.16
Vma21Q78T54 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC14.04□□□□□ -0.16
Vma21Q78T54 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
Vma21Q78T54 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC14.04□□□□□ -0.16
Vma21Q78T54 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC14.03□□□□□ -0.16
Vma21Q78T54 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Gm15847-201ENSMUST00000121417 1065 ntBASIC14.03□□□□□ -0.16
Vma21Q78T54 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC14.03□□□□□ -0.16
Vma21Q78T54 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.03□□□□□ -0.16
Vma21Q78T54 Mir2861-201ENSMUST00000175539 82 ntBASIC14.03□□□□□ -0.16
Vma21Q78T54 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC14.03□□□□□ -0.16
Vma21Q78T54 AC133650.2-201ENSMUST00000217036 607 ntTSL 3 BASIC14.03□□□□□ -0.16
Vma21Q78T54 Cox14-201ENSMUST00000023761 723 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.03□□□□□ -0.16
Vma21Q78T54 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.03□□□□□ -0.16
Vma21Q78T54 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Vma21Q78T54 Jade2-201ENSMUST00000020655 6273 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vma21Q78T54 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC14.02□□□□□ -0.16
Vma21Q78T54 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vma21Q78T54 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vma21Q78T54 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
Vma21Q78T54 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
Vma21Q78T54 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.16
Vma21Q78T54 Arl2bp-202ENSMUST00000109527 1133 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vma21Q78T54 Gm11927-201ENSMUST00000118472 759 ntBASIC14.02□□□□□ -0.17
Vma21Q78T54 Atraid-201ENSMUST00000013766 966 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vma21Q78T54 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vma21Q78T54 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Gm29241-201ENSMUST00000189260 1096 ntBASIC14.02□□□□□ -0.17
Vma21Q78T54 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Stxbp6-201ENSMUST00000053768 4553 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
Vma21Q78T54 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
Vma21Q78T54 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
Vma21Q78T54 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC14.01□□□□□ -0.17
Vma21Q78T54 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Vma21Q78T54 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms