Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Iqck-206ENSMUST00000208658 2891 ntBASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Foxj2-201ENSMUST00000003238 5283 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
Ddx55Q6ZPL9 Stim2-201ENSMUST00000117661 4934 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Hpn-202ENSMUST00000108102 1830 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Rcan3-201ENSMUST00000030606 5111 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Ddx55Q6ZPL9 Gm11452-201ENSMUST00000122376 690 ntBASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Gm15510-201ENSMUST00000123644 1172 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Hnrnpa1l2-ps-201ENSMUST00000129154 964 ntBASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Ank1-201ENSMUST00000033947 1030 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC19.58■□□□□ 0.72
Ddx55Q6ZPL9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Phf7-203ENSMUST00000226565 1971 ntBASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Hrh3-201ENSMUST00000056480 2706 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Timm13-204ENSMUST00000219896 542 ntTSL 3 BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 AC159301.1-201ENSMUST00000225130 1182 ntBASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Ccdc50-201ENSMUST00000039443 2192 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
Ddx55Q6ZPL9 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Syndig1-202ENSMUST00000109935 2050 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Papola-212ENSMUST00000168186 2436 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Ctsg-201ENSMUST00000015583 1002 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Gm10052-201ENSMUST00000168019 960 ntBASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Gm18733-201ENSMUST00000173950 856 ntBASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Gm7729-201ENSMUST00000050143 801 ntBASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 March3-202ENSMUST00000102912 1754 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.56■□□□□ 0.72
Ddx55Q6ZPL9 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Rab5a-201ENSMUST00000017975 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Nmu-201ENSMUST00000031146 828 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Pgf-204ENSMUST00000223220 2080 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Ddx55Q6ZPL9 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Gnptg-202ENSMUST00000115154 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 5031439G07Rik-201ENSMUST00000047144 6845 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Ddx55Q6ZPL9 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms