Protein–RNA interactions for Protein: Q6PR54

Rif1, Telomere-associated protein RIF1, mousemouse

Known RBP Predictions only

Length 2,419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rif1Q6PR54 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Vps37d-202ENSMUST00000076203 1286 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Klhdc3-202ENSMUST00000165007 1973 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Set-201ENSMUST00000067996 2834 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Nlgn2-201ENSMUST00000056484 5003 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 AC153794.1-201ENSMUST00000169148 126 ntBASIC14.49□□□□□ -0.09
Rif1Q6PR54 Gm9731-201ENSMUST00000209480 747 ntBASIC14.49□□□□□ -0.09
Rif1Q6PR54 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Rif1Q6PR54 Snx20-201ENSMUST00000034087 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 D16Ertd472e-202ENSMUST00000114219 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Gm13312-201ENSMUST00000119631 718 ntBASIC14.48□□□□□ -0.09
Rif1Q6PR54 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Riox1-201ENSMUST00000053744 2344 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Uba5-201ENSMUST00000035166 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Rif1Q6PR54 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Alms1-ps2-201ENSMUST00000160606 1170 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 AC122351.1-201ENSMUST00000220467 126 ntBASIC14.47□□□□□ -0.09
Rif1Q6PR54 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Gatad1-201ENSMUST00000007559 2545 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Rif1Q6PR54 Hnrnpl-211ENSMUST00000174548 2679 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Soat2-201ENSMUST00000023806 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Dmrta2-201ENSMUST00000061187 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Map2k2-207ENSMUST00000143517 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Lmbr1l-201ENSMUST00000023736 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Usp39-201ENSMUST00000070345 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Calml3-201ENSMUST00000077698 1421 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Gm4913-201ENSMUST00000117075 1290 ntBASIC14.46□□□□□ -0.09
Rif1Q6PR54 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Nat8b-ps-201ENSMUST00000162660 699 ntBASIC14.46□□□□□ -0.09
Rif1Q6PR54 Gm4535-201ENSMUST00000182274 558 ntBASIC14.46□□□□□ -0.09
Rif1Q6PR54 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 AC153845.2-202ENSMUST00000213372 807 ntTSL 3 BASIC14.46□□□□□ -0.09
Rif1Q6PR54 B4galt4-205ENSMUST00000114712 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Rif1Q6PR54 Paics-203ENSMUST00000120912 2345 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Rif1Q6PR54 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rif1Q6PR54 Gm18856-201ENSMUST00000178096 1374 ntBASIC14.46□□□□□ -0.1
Rif1Q6PR54 Lpcat2-205ENSMUST00000210099 2179 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Rif1Q6PR54 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Phospho1-201ENSMUST00000054173 1910 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Sra1-201ENSMUST00000001415 2061 ntAPPRIS P4 TSL 5 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Fmnl2-201ENSMUST00000049483 5461 ntTSL 5 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 P2rx5-201ENSMUST00000006104 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 6430500D05Rik-201ENSMUST00000198286 1176 ntBASIC14.45□□□□□ -0.1
Rif1Q6PR54 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Prkg2-201ENSMUST00000031277 2618 ntTSL 5 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Fzd8-201ENSMUST00000041080 3346 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Rif1Q6PR54 Dnajc2-201ENSMUST00000030771 2133 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms