Protein–RNA interactions for Protein: Q6PHS6

Snx13, Sorting nexin-13, mousemouse

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snx13Q6PHS6 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Atp11a-201ENSMUST00000033818 7549 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
Snx13Q6PHS6 Bicc1-203ENSMUST00000143791 5431 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Gm6365-201ENSMUST00000054711 744 ntBASIC19.46■□□□□ 0.71
Snx13Q6PHS6 G3bp2-204ENSMUST00000169094 2716 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Tlk1-201ENSMUST00000038584 4280 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Snx13Q6PHS6 Wdr20-205ENSMUST00000193053 1351 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Crtac1-201ENSMUST00000048630 2616 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Ptgis-201ENSMUST00000018113 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Erh-205ENSMUST00000218740 981 ntTSL 2 BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Dtnbp1-208ENSMUST00000222805 1231 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Gm36858-201ENSMUST00000194501 2391 ntBASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Snx13Q6PHS6 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Large2-215ENSMUST00000176810 2477 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Cox6a1-201ENSMUST00000040154 571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.44■□□□□ 0.7
Snx13Q6PHS6 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Wnt10b-205ENSMUST00000226846 1204 ntBASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Dhx36-201ENSMUST00000029336 5620 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
Snx13Q6PHS6 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Gm10435-202ENSMUST00000162526 2878 ntTSL 5 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Zfp512b-201ENSMUST00000108789 5714 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 D830036C21Rik-201ENSMUST00000207444 453 ntTSL 3 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Saysd1-201ENSMUST00000059666 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Prpf40b-212ENSMUST00000145482 3308 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Car2-201ENSMUST00000029078 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 Pigz-201ENSMUST00000052174 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
Snx13Q6PHS6 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Etv2-201ENSMUST00000108147 1048 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Matn4-201ENSMUST00000103103 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Snx13Q6PHS6 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms