Protein–RNA interactions for Protein: Q6PDX6

Rnf220, E3 ubiquitin-protein ligase Rnf220, mousemouse

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf220Q6PDX6 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Morf4l1-211ENSMUST00000191189 1223 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Ppp3ca-201ENSMUST00000056758 2194 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Ogfr-201ENSMUST00000029087 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC16.35■□□□□ 0.21
Rnf220Q6PDX6 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Macrod2-202ENSMUST00000078027 1669 ntAPPRIS P2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Lmo1-201ENSMUST00000036992 1282 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Unc50-201ENSMUST00000027285 1414 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Nfe2-210ENSMUST00000156927 1608 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Lhx2-203ENSMUST00000143783 1696 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
Rnf220Q6PDX6 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Foxp1-225ENSMUST00000177229 1848 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Depdc7-201ENSMUST00000028595 1801 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Cacna1a-202ENSMUST00000122053 7589 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
Rnf220Q6PDX6 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 CT010467.1-202ENSMUST00000205406 714 ntBASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Gm19094-201ENSMUST00000209791 1246 ntBASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 1700017B05Rik-204ENSMUST00000215298 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Lin7a-203ENSMUST00000218031 1769 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Chka-202ENSMUST00000072055 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Tead3-206ENSMUST00000156862 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Rnf220Q6PDX6 Gm16011-201ENSMUST00000121567 2662 ntBASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Golga7-201ENSMUST00000051094 1792 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Rnf220Q6PDX6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Kctd13-201ENSMUST00000032924 1676 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.31■□□□□ 0.2
Rnf220Q6PDX6 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms