Protein–RNA interactions for Protein: Q6P9Z1

Smarcd3, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 3, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcd3Q6P9Z1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Mir2861-201ENSMUST00000175539 82 ntBASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Gm36210-201ENSMUST00000210663 1279 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Irx4-202ENSMUST00000176684 2384 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Smarcd3Q6P9Z1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Zfp668-203ENSMUST00000106262 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Adamtsl5-202ENSMUST00000105352 989 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Rpl27-202ENSMUST00000107249 732 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Mrpl9-202ENSMUST00000196143 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Gm43272-201ENSMUST00000200599 1584 ntBASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Hsbp1-201ENSMUST00000034300 1208 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Smarcd3Q6P9Z1 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Gm15743-202ENSMUST00000182690 1901 ntBASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Vopp1-201ENSMUST00000114297 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Gorasp2-203ENSMUST00000112205 1196 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Snca-201ENSMUST00000114268 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Gm11927-201ENSMUST00000118472 759 ntBASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Selenom-201ENSMUST00000094469 707 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Chmp2b-201ENSMUST00000004965 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smarcd3Q6P9Z1 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Gm16141-201ENSMUST00000152073 790 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Gm37179-201ENSMUST00000194862 823 ntBASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Nrn1l-201ENSMUST00000060167 617 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Fbxo22-201ENSMUST00000034859 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Mrpl15-205ENSMUST00000146665 1569 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smarcd3Q6P9Z1 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC15.78■□□□□ 0.12
Smarcd3Q6P9Z1 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd3Q6P9Z1 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Smarcd3Q6P9Z1 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms