Protein–RNA interactions for Protein: Q6P9L4

Usp49, Ubiquitin carboxyl-terminal hydrolase 49, mousemouse

Predictions only

Length 685 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp49Q6P9L4 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Dpep3-201ENSMUST00000034371 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Usp49Q6P9L4 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Rps23-201ENSMUST00000051955 937 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Alkbh5-201ENSMUST00000044250 5730 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Fam109a-203ENSMUST00000198271 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 St7l-201ENSMUST00000059271 5728 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Usp49Q6P9L4 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 AC154649.1-201ENSMUST00000227392 384 ntBASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Itsn2-201ENSMUST00000062580 5987 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 E230001N04Rik-202ENSMUST00000181029 2091 ntBASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Gm11841-201ENSMUST00000117060 1963 ntBASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Pid1-201ENSMUST00000168574 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Usp49Q6P9L4 Nrxn2-204ENSMUST00000113461 5505 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 A930029G22Rik-201ENSMUST00000181032 1710 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Rgs19-207ENSMUST00000108779 642 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Farp1-201ENSMUST00000026635 4885 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC19.23■□□□□ 0.67
Usp49Q6P9L4 Uhrf2-201ENSMUST00000025739 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 C1qtnf5-202ENSMUST00000114816 1259 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Gm45244-201ENSMUST00000211328 2200 ntBASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Usp49Q6P9L4 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Rps6ka2-201ENSMUST00000024575 5404 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Ctcf-201ENSMUST00000005841 3782 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC19.21■□□□□ 0.67
Usp49Q6P9L4 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Gm16401-202ENSMUST00000197463 2074 ntBASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Gm715-201ENSMUST00000117865 831 ntBASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Gm20695-202ENSMUST00000176233 1012 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Usp49Q6P9L4 Mir7071-201ENSMUST00000184847 69 ntBASIC19.2■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms