Protein–RNA interactions for Protein: Q6P2L7

Casc4, Protein CASC4, mousemouse

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Casc4Q6P2L7 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Casc4Q6P2L7 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 AC121598.2-201ENSMUST00000228376 2325 ntBASIC17.42■□□□□ 0.38
Casc4Q6P2L7 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Josd2-206ENSMUST00000121922 684 ntTSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Casc4Q6P2L7 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Ubac2-201ENSMUST00000039803 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Casc4Q6P2L7 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 8030462N17Rik-201ENSMUST00000074653 3418 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 4930554C24Rik-202ENSMUST00000216019 1159 ntTSL 5 BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC17.4■□□□□ 0.38
Casc4Q6P2L7 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
Casc4Q6P2L7 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Mir5122-201ENSMUST00000175004 89 ntBASIC17.39■□□□□ 0.37
Casc4Q6P2L7 D330020A13Rik-201ENSMUST00000181956 1069 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Pomc-204ENSMUST00000219543 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Timm23-208ENSMUST00000226683 750 ntBASIC17.39■□□□□ 0.37
Casc4Q6P2L7 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Otx2os1-204ENSMUST00000227221 751 ntBASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Odf3b-204ENSMUST00000227834 930 ntBASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Tmed3-201ENSMUST00000058488 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Casc4Q6P2L7 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Mir8112-201ENSMUST00000184382 131 ntBASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Espn-202ENSMUST00000049305 1142 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Nme2-202ENSMUST00000072566 734 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Fjx1-201ENSMUST00000099678 3134 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Casc4Q6P2L7 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms