Protein–RNA interactions for Protein: Q6IRU2

Tpm4, Tropomyosin alpha-4 chain, mousemouse

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm4Q6IRU2 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Espn-209ENSMUST00000105655 1350 ntTSL 5 BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC19.27■□□□□ 0.68
Tpm4Q6IRU2 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC19.27■□□□□ 0.67
Tpm4Q6IRU2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm4Q6IRU2 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm4Q6IRU2 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tpm4Q6IRU2 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Ptpa-202ENSMUST00000113601 1838 ntTSL 5 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Tmem80-201ENSMUST00000026578 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Rims3-201ENSMUST00000071093 6505 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Gm8495-201ENSMUST00000188740 694 ntBASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Gm45774-201ENSMUST00000211992 2665 ntBASIC19.26■□□□□ 0.67
Tpm4Q6IRU2 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 1700030C12Rik-201ENSMUST00000101462 858 ntTSL 5 BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Ostf1-201ENSMUST00000025631 2726 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tpm4Q6IRU2 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Guf1-202ENSMUST00000087228 3433 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC19.24■□□□□ 0.67
Tpm4Q6IRU2 Marveld1-201ENSMUST00000061111 3066 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Snx3-202ENSMUST00000105499 1057 ntTSL 5 BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Bnip1-201ENSMUST00000015725 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Rab3c-203ENSMUST00000224180 967 ntBASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Cystm1-201ENSMUST00000050584 831 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.23■□□□□ 0.67
Tpm4Q6IRU2 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Ttc32-202ENSMUST00000219470 1645 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Boll-203ENSMUST00000159398 658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Gm26524-201ENSMUST00000192339 390 ntBASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tpm4Q6IRU2 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 16.3 ms