Protein–RNA interactions for Protein: Q6IFX4

Krt39, Keratin, type I cytoskeletal 39, mousemouse

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt39Q6IFX4 Gm27029-201ENSMUST00000107257 1898 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
Krt39Q6IFX4 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Gm20628-201ENSMUST00000177363 3215 ntBASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Gm12441-201ENSMUST00000121806 588 ntBASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Usp48-201ENSMUST00000055131 5722 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
Krt39Q6IFX4 Ctdsp2-202ENSMUST00000105256 4817 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Spr-202ENSMUST00000174286 775 ntTSL 2 BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Gm5297-201ENSMUST00000198555 1171 ntBASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Gm9954-202ENSMUST00000198686 4725 ntBASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC19.03■□□□□ 0.64
Krt39Q6IFX4 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gm11620-201ENSMUST00000118770 1845 ntBASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Mybl2-201ENSMUST00000018005 3651 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gm11643-201ENSMUST00000119578 864 ntBASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Mir6349-201ENSMUST00000184059 97 ntBASIC19.02■□□□□ 0.64
Krt39Q6IFX4 2310068J16Rik-201ENSMUST00000188271 1124 ntBASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Gtf2h2-201ENSMUST00000066940 1065 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
Krt39Q6IFX4 Coro2a-202ENSMUST00000107756 4154 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt39Q6IFX4 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC19.02■□□□□ 0.63
Krt39Q6IFX4 Wdr1-201ENSMUST00000005234 3089 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
Krt39Q6IFX4 Apba1-201ENSMUST00000025830 6632 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Crybb1-201ENSMUST00000031286 882 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Tfap2a-209ENSMUST00000225180 1828 ntBASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Lrrc58-201ENSMUST00000078717 8604 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Tia1-203ENSMUST00000095754 1789 ntAPPRIS ALT1 TSL 5 BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
Krt39Q6IFX4 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
Krt39Q6IFX4 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC19■□□□□ 0.63
Krt39Q6IFX4 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Dvl3-204ENSMUST00000171774 2319 ntTSL 5 BASIC19■□□□□ 0.63
Krt39Q6IFX4 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Rbm39-202ENSMUST00000109584 667 ntTSL 5 BASIC19■□□□□ 0.63
Krt39Q6IFX4 Gm13216-201ENSMUST00000117145 591 ntBASIC19■□□□□ 0.63
Krt39Q6IFX4 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Gm10138-203ENSMUST00000206952 366 ntBASIC19■□□□□ 0.63
Krt39Q6IFX4 Hsbp1-202ENSMUST00000212468 638 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Krt39Q6IFX4 Spcs1-207ENSMUST00000228767 1008 ntBASIC19■□□□□ 0.63
Krt39Q6IFX4 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC19■□□□□ 0.63
Krt39Q6IFX4 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
Krt39Q6IFX4 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
Krt39Q6IFX4 Mapk8ip3-221ENSMUST00000178969 5579 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms