Protein–RNA interactions for Protein: Q6DID3

Scaf8, Protein SCAF8, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf8Q6DID3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf8Q6DID3 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf8Q6DID3 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf8Q6DID3 Gsx2-201ENSMUST00000040477 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Scaf8Q6DID3 Rora-202ENSMUST00000113624 2591 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Cdk4-201ENSMUST00000006911 2053 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Nrn1l-202ENSMUST00000118920 603 ntAPPRIS ALT2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Dynll2-204ENSMUST00000178105 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Gm6296-201ENSMUST00000222599 943 ntBASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Pias2-202ENSMUST00000114777 4968 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Epdr1-201ENSMUST00000002885 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Scaf8Q6DID3 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 AC160338.1-201ENSMUST00000214232 705 ntBASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Scaf11-201ENSMUST00000047835 5766 ntTSL 5 BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Scaf8Q6DID3 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Bnc2-214ENSMUST00000176612 3963 ntTSL 5 BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Neil2-201ENSMUST00000038229 1932 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gm8000-201ENSMUST00000188378 592 ntBASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gm6376-201ENSMUST00000209407 580 ntBASIC20.04■□□□□ 0.8
Scaf8Q6DID3 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Scaf8Q6DID3 Lrrc43-203ENSMUST00000196809 2031 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Mthfd2-201ENSMUST00000005810 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Gm42790-201ENSMUST00000201268 969 ntBASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Rps4l-201ENSMUST00000071745 943 ntBASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Gm5784-201ENSMUST00000179344 2478 ntBASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC20.03■□□□□ 0.8
Scaf8Q6DID3 Sh3glb1-205ENSMUST00000199854 1416 ntTSL 5 BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Sqor-201ENSMUST00000005953 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Prmt6-201ENSMUST00000106567 2450 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
Scaf8Q6DID3 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
Scaf8Q6DID3 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm7862-201ENSMUST00000121461 292 ntBASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm5364-201ENSMUST00000216789 889 ntBASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gm15558-201ENSMUST00000126849 2018 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Amdhd1-201ENSMUST00000016034 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
Scaf8Q6DID3 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf8Q6DID3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
Scaf8Q6DID3 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20■□□□□ 0.79
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms