Protein–RNA interactions for Protein: Q6A026

Pds5a, Sister chromatid cohesion protein PDS5 homolog A, mousemouse

Predictions only

Length 1,332 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pds5aQ6A026 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pds5aQ6A026 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
Pds5aQ6A026 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pds5aQ6A026 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Pds5aQ6A026 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Pds5aQ6A026 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
Pds5aQ6A026 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.55
Pds5aQ6A026 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Gm29994-201ENSMUST00000195495 1193 ntBASIC18.51■□□□□ 0.55
Pds5aQ6A026 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
Pds5aQ6A026 AC121598.2-201ENSMUST00000228376 2325 ntBASIC18.51■□□□□ 0.55
Pds5aQ6A026 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Gnao1-201ENSMUST00000034198 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Chd5-202ENSMUST00000030775 9486 ntAPPRIS P3 TSL 5 BASIC18.51■□□□□ 0.55
Pds5aQ6A026 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
Pds5aQ6A026 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
Pds5aQ6A026 Gm13836-201ENSMUST00000121159 501 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gm2274-201ENSMUST00000184539 609 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Ppm1h-201ENSMUST00000067918 6369 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Spire1-203ENSMUST00000115050 5405 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Trim25-202ENSMUST00000100627 1433 ntTSL 5 BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gm10231-201ENSMUST00000181584 441 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 Atp5g2-202ENSMUST00000185641 731 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gm10175-202ENSMUST00000208752 441 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gm7370-201ENSMUST00000219471 767 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 AC158538.1-201ENSMUST00000225870 294 ntBASIC18.49■□□□□ 0.55
Pds5aQ6A026 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Atp5g2-201ENSMUST00000075630 441 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Pds5aQ6A026 Gm37519-201ENSMUST00000191687 2210 ntBASIC18.48■□□□□ 0.55
Pds5aQ6A026 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Fbrsl1-206ENSMUST00000198834 2571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Stim2-204ENSMUST00000201469 4892 ntAPPRIS ALT2 TSL 5 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gm11532-201ENSMUST00000128111 5272 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Pds5aQ6A026 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gm18959-201ENSMUST00000208954 655 ntBASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Gm26709-202ENSMUST00000223049 819 ntTSL 5 BASIC18.48■□□□□ 0.55
Pds5aQ6A026 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Pds5aQ6A026 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Pds5aQ6A026 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Retrieved 100 of 76,532 protein–RNA pairs in 11.1 ms