Protein–RNA interactions for Protein: Q65CL1

Ctnna3, Catenin alpha-3, mousemouse

Predictions only

Length 895 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctnna3Q65CL1 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Gm13559-201ENSMUST00000120476 863 ntBASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Gm18025-201ENSMUST00000221733 862 ntBASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Odf3b-204ENSMUST00000227834 930 ntBASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Kmt5c-201ENSMUST00000098853 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Olfr94-203ENSMUST00000222190 1611 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Ctnna3Q65CL1 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Scrib-203ENSMUST00000109946 5545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Gm10459-201ENSMUST00000202708 1155 ntBASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Aatk-203ENSMUST00000103020 5687 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Ctnna3Q65CL1 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Cdpf1-204ENSMUST00000144067 761 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Zfp428-203ENSMUST00000177205 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Gm16042-201ENSMUST00000204813 1247 ntBASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Idnk-204ENSMUST00000226010 1898 ntBASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Ctnna3Q65CL1 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Ctnna3Q65CL1 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Ctnna3Q65CL1 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Nkx2-2-203ENSMUST00000109970 1053 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Timm23-208ENSMUST00000226683 750 ntBASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Klhl5-204ENSMUST00000204097 3149 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Gtpbp3-208ENSMUST00000168847 2803 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Ctnna3Q65CL1 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Gm6728-201ENSMUST00000178117 1065 ntBASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Gm15743-202ENSMUST00000182690 1901 ntBASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Map3k1-201ENSMUST00000109267 6978 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Ctnna3Q65CL1 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Ctnna3Q65CL1 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms