Protein–RNA interactions for Protein: Q64739

Col11a2, Collagen alpha-2(XI) chain, mousemouse

Predictions only

Length 1,736 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a2Q64739 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Slc17a7-202ENSMUST00000209634 1860 ntTSL 5 BASIC20.89■□□□□ 0.93
Col11a2Q64739 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Jdp2-202ENSMUST00000171754 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC20.89■□□□□ 0.93
Col11a2Q64739 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC20.89■□□□□ 0.93
Col11a2Q64739 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC20.89■□□□□ 0.93
Col11a2Q64739 Npcd-201ENSMUST00000023060 1162 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
Col11a2Q64739 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC20.88■□□□□ 0.93
Col11a2Q64739 Oaf-201ENSMUST00000034512 2526 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col11a2Q64739 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC20.88■□□□□ 0.93
Col11a2Q64739 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
Col11a2Q64739 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
Col11a2Q64739 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
Col11a2Q64739 Ogfod3-201ENSMUST00000026169 1308 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Mpp3-203ENSMUST00000107167 2066 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 C630004M23Rik-201ENSMUST00000194765 1682 ntBASIC20.87■□□□□ 0.93
Col11a2Q64739 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Ubb-201ENSMUST00000019649 1499 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 AC159093.1-201ENSMUST00000227779 380 ntBASIC20.87■□□□□ 0.93
Col11a2Q64739 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col11a2Q64739 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
Col11a2Q64739 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC20.87■□□□□ 0.93
Col11a2Q64739 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC20.87■□□□□ 0.93
Col11a2Q64739 A730060N03Rik-201ENSMUST00000174277 2124 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC20.87■□□□□ 0.93
Col11a2Q64739 AC154621.1-201ENSMUST00000226155 1119 ntBASIC20.87■□□□□ 0.93
Col11a2Q64739 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
Col11a2Q64739 Rbms1-209ENSMUST00000164147 2543 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Mast4-202ENSMUST00000164111 2350 ntTSL 2 BASIC20.86■□□□□ 0.93
Col11a2Q64739 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
Col11a2Q64739 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.86■□□□□ 0.93
Col11a2Q64739 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC20.86■□□□□ 0.93
Col11a2Q64739 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Col11a2Q64739 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Gm20878-206ENSMUST00000153997 903 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
Col11a2Q64739 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC20.85■□□□□ 0.93
Col11a2Q64739 Gm42670-201ENSMUST00000201816 1292 ntBASIC20.85■□□□□ 0.93
Col11a2Q64739 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Coq10b-202ENSMUST00000087617 834 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 St8sia5-202ENSMUST00000079618 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
Col11a2Q64739 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
Col11a2Q64739 P2ry2-204ENSMUST00000207916 2372 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col11a2Q64739 Gm5264-201ENSMUST00000190584 848 ntBASIC20.84■□□□□ 0.93
Col11a2Q64739 CT009713.7-201ENSMUST00000224689 571 ntBASIC20.84■□□□□ 0.93
Col11a2Q64739 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC20.84■□□□□ 0.93
Col11a2Q64739 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col11a2Q64739 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col11a2Q64739 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
Col11a2Q64739 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col11a2Q64739 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.84■□□□□ 0.93
Col11a2Q64739 Gm29707-201ENSMUST00000196325 491 ntBASIC20.84■□□□□ 0.93
Col11a2Q64739 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC20.84■□□□□ 0.93
Col11a2Q64739 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
Col11a2Q64739 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col11a2Q64739 Tnfrsf25-202ENSMUST00000035275 1603 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col11a2Q64739 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Col11a2Q64739 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
Col11a2Q64739 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Fam19a5-201ENSMUST00000068088 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC20.83■□□□□ 0.92
Col11a2Q64739 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
Col11a2Q64739 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC20.82■□□□□ 0.92
Col11a2Q64739 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
Col11a2Q64739 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC20.82■□□□□ 0.92
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms