Protein–RNA interactions for Protein: Q62247

Sox16, Protein SOX-16 (Fragment), mousemouse

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox16Q62247 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
Sox16Q62247 Gm38058-201ENSMUST00000194323 4368 ntBASIC9.79□□□□□ -0.84
Sox16Q62247 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sox16Q62247 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
Sox16Q62247 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC9.79□□□□□ -0.84
Sox16Q62247 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sox16Q62247 Nox4-202ENSMUST00000068829 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
Sox16Q62247 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Nek1-201ENSMUST00000034065 5401 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Usp4-201ENSMUST00000035237 3662 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Ilk-201ENSMUST00000033182 1795 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Rcbtb1-201ENSMUST00000022551 3957 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC9.78□□□□□ -0.84
Sox16Q62247 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
Sox16Q62247 Kalrn-201ENSMUST00000076810 8940 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
Sox16Q62247 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Dmrt1-201ENSMUST00000025755 2340 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Gm21451-201ENSMUST00000111062 2775 ntBASIC9.78□□□□□ -0.84
Sox16Q62247 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
Sox16Q62247 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox16Q62247 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC9.77□□□□□ -0.84
Sox16Q62247 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox16Q62247 Pbld1-201ENSMUST00000020266 2407 ntAPPRIS ALT1 TSL 5 BASIC9.77□□□□□ -0.84
Sox16Q62247 Cct7-201ENSMUST00000032078 2441 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox16Q62247 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.84
Sox16Q62247 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC9.77□□□□□ -0.85
Sox16Q62247 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC9.77□□□□□ -0.85
Sox16Q62247 AC123738.2-201ENSMUST00000223791 1899 ntBASIC9.77□□□□□ -0.85
Sox16Q62247 Pdpk1-203ENSMUST00000115407 1730 ntTSL 5 BASIC9.77□□□□□ -0.85
Sox16Q62247 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Tmem230-202ENSMUST00000110163 1551 ntAPPRIS P1 TSL 3 BASIC9.77□□□□□ -0.85
Sox16Q62247 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sox16Q62247 Usp24-204ENSMUST00000165709 10594 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sox16Q62247 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC9.77□□□□□ -0.85
Sox16Q62247 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC9.77□□□□□ -0.85
Sox16Q62247 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC9.77□□□□□ -0.85
Sox16Q62247 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Srd5a3-201ENSMUST00000031143 1747 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 E130208F15Rik-201ENSMUST00000098585 1733 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sox16Q62247 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC9.76□□□□□ -0.85
Sox16Q62247 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Cgref1-201ENSMUST00000031051 1442 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Ppp3cc-201ENSMUST00000078434 1970 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Avl9-203ENSMUST00000177249 1614 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Phox2b-202ENSMUST00000174251 1177 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Scn5a-202ENSMUST00000117911 8453 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Hspa4l-208ENSMUST00000204702 9479 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC9.76□□□□□ -0.85
Sox16Q62247 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Kis2-201ENSMUST00000133214 1717 ntTSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Actr3b-201ENSMUST00000088244 1712 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC9.76□□□□□ -0.85
Sox16Q62247 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC9.76□□□□□ -0.85
Sox16Q62247 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC9.76□□□□□ -0.85
Sox16Q62247 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC9.75□□□□□ -0.85
Sox16Q62247 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sox16Q62247 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC9.75□□□□□ -0.85
Sox16Q62247 Spock1-204ENSMUST00000186271 2005 ntAPPRIS P3 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 Zfp287-205ENSMUST00000150336 1605 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 AC117245.4-201ENSMUST00000217388 1646 ntBASIC9.75□□□□□ -0.85
Sox16Q62247 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 Fbrsl1-201ENSMUST00000056124 2700 ntTSL 2 BASIC9.75□□□□□ -0.85
Sox16Q62247 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC9.75□□□□□ -0.85
Sox16Q62247 Fhl1-203ENSMUST00000114769 2770 ntTSL 1 (best) BASIC9.75□□□□□ -0.85
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms