Protein–RNA interactions for Protein: Q62018

Ctr9, RNA polymerase-associated protein CTR9 homolog, mousemouse

Known RBP Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctr9Q62018 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
Ctr9Q62018 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
Ctr9Q62018 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ctr9Q62018 Gm18032-201ENSMUST00000222541 538 ntBASIC20.28■□□□□ 0.84
Ctr9Q62018 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC20.28■□□□□ 0.84
Ctr9Q62018 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ctr9Q62018 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Ctr9Q62018 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Gm16061-201ENSMUST00000122167 857 ntBASIC20.27■□□□□ 0.84
Ctr9Q62018 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Ctr9Q62018 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC20.27■□□□□ 0.84
Ctr9Q62018 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.27■□□□□ 0.84
Ctr9Q62018 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ctr9Q62018 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ctr9Q62018 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
Ctr9Q62018 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
Ctr9Q62018 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.83
Ctr9Q62018 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ctr9Q62018 Arrb1-210ENSMUST00000179755 7135 ntTSL 5 BASIC20.26■□□□□ 0.83
Ctr9Q62018 Arrb1-202ENSMUST00000098266 7132 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Gm1673-202ENSMUST00000114382 451 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
Ctr9Q62018 H2afz-207ENSMUST00000174561 810 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC20.26■□□□□ 0.83
Ctr9Q62018 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
Ctr9Q62018 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC20.26■□□□□ 0.83
Ctr9Q62018 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.26■□□□□ 0.83
Ctr9Q62018 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Ctr9Q62018 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
Ctr9Q62018 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Ctr9Q62018 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC20.24■□□□□ 0.83
Ctr9Q62018 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 Gm7854-202ENSMUST00000187409 1433 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Ctr9Q62018 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC20.24■□□□□ 0.83
Ctr9Q62018 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Tmem131-201ENSMUST00000027290 6546 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Mtg2-202ENSMUST00000108901 1444 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Psmd13-209ENSMUST00000164681 726 ntTSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Gm6659-201ENSMUST00000174752 547 ntBASIC20.23■□□□□ 0.83
Ctr9Q62018 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
Ctr9Q62018 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Ctr9Q62018 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC20.23■□□□□ 0.83
Ctr9Q62018 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Ctr9Q62018 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ctr9Q62018 Dock9-202ENSMUST00000100299 6476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctr9Q62018 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctr9Q62018 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
Ctr9Q62018 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Ctr9Q62018 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Ctr9Q62018 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Ctr9Q62018 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.22■□□□□ 0.83
Ctr9Q62018 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.21■□□□□ 0.83
Ctr9Q62018 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ctr9Q62018 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
Ctr9Q62018 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Gm13474-201ENSMUST00000122466 815 ntBASIC20.21■□□□□ 0.83
Ctr9Q62018 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Ctr9Q62018 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms