Protein–RNA interactions for Protein: Q61180

Scnn1a, Amiloride-sensitive sodium channel subunit alpha, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scnn1aQ61180 Glra1-203ENSMUST00000108853 1797 ntTSL 5 BASIC19.82■□□□□ 0.76
Scnn1aQ61180 Chpt1-203ENSMUST00000117440 4863 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
Scnn1aQ61180 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Cyb5d2-201ENSMUST00000079681 2393 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC19.81■□□□□ 0.76
Scnn1aQ61180 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Acaa1a-203ENSMUST00000175743 1219 ntTSL 5 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Acaa1a-207ENSMUST00000176397 996 ntTSL 5 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Dmtn-207ENSMUST00000228001 2437 ntBASIC19.8■□□□□ 0.76
Scnn1aQ61180 AU019823-202ENSMUST00000145139 2805 ntTSL 2 BASIC19.8■□□□□ 0.76
Scnn1aQ61180 Zdhhc6-209ENSMUST00000225495 1711 ntBASIC19.79■□□□□ 0.76
Scnn1aQ61180 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Gm11950-201ENSMUST00000121615 838 ntBASIC19.79■□□□□ 0.76
Scnn1aQ61180 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC19.79■□□□□ 0.76
Scnn1aQ61180 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC19.79■□□□□ 0.76
Scnn1aQ61180 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
Scnn1aQ61180 B3gnt2-202ENSMUST00000062844 3057 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Scnn1aQ61180 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC19.78■□□□□ 0.76
Scnn1aQ61180 AC122351.1-201ENSMUST00000220467 126 ntBASIC19.78■□□□□ 0.76
Scnn1aQ61180 Shisa7-203ENSMUST00000119433 3481 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Zfp746-203ENSMUST00000203609 3648 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Mzt1-201ENSMUST00000042662 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Scnn1aQ61180 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Kbtbd13-201ENSMUST00000068307 2969 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
Scnn1aQ61180 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Rdx-202ENSMUST00000061352 1502 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Lman2l-202ENSMUST00000115011 2290 ntTSL 5 BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Zscan12-201ENSMUST00000053293 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Gm27704-201ENSMUST00000185094 107 ntBASIC19.77■□□□□ 0.76
Scnn1aQ61180 Ank2-226ENSMUST00000189368 339 ntBASIC19.77■□□□□ 0.76
Scnn1aQ61180 Ctbp2-201ENSMUST00000033269 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Cxcl14-202ENSMUST00000224801 1467 ntBASIC19.77■□□□□ 0.76
Scnn1aQ61180 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Spata2l-202ENSMUST00000166768 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Farsa-202ENSMUST00000109754 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Scnn1aQ61180 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
Scnn1aQ61180 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
Scnn1aQ61180 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Cyp4f16-201ENSMUST00000003416 2227 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Sap18-202ENSMUST00000111268 662 ntTSL 2 BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC19.76■□□□□ 0.75
Scnn1aQ61180 Mipol1-201ENSMUST00000123498 2117 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
Scnn1aQ61180 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
Scnn1aQ61180 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scnn1aQ61180 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scnn1aQ61180 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Scnn1aQ61180 Fam105a-203ENSMUST00000226170 3043 ntBASIC19.75■□□□□ 0.75
Scnn1aQ61180 Nphp3-201ENSMUST00000035167 5899 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Mir770-201ENSMUST00000103252 94 ntBASIC19.74■□□□□ 0.75
Scnn1aQ61180 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 AC130713.1-201ENSMUST00000228853 1096 ntBASIC19.74■□□□□ 0.75
Scnn1aQ61180 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Cebpg-202ENSMUST00000130491 4709 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
Scnn1aQ61180 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms