Protein–RNA interactions for Protein: Q61112

Sdf4, 45 kDa calcium-binding protein, mousemouse

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdf4Q61112 Gm715-201ENSMUST00000117865 831 ntBASIC17.47■□□□□ 0.39
Sdf4Q61112 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Gm16042-201ENSMUST00000204813 1247 ntBASIC17.47■□□□□ 0.39
Sdf4Q61112 Timm23-208ENSMUST00000226683 750 ntBASIC17.47■□□□□ 0.39
Sdf4Q61112 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Igf2-205ENSMUST00000121128 4722 ntTSL 2 BASIC17.47■□□□□ 0.39
Sdf4Q61112 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 Tulp1-201ENSMUST00000041819 2017 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Sdf4Q61112 AC125311.2-201ENSMUST00000227477 1940 ntBASIC17.47■□□□□ 0.39
Sdf4Q61112 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC17.46■□□□□ 0.39
Sdf4Q61112 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Gm37025-201ENSMUST00000195159 829 ntBASIC17.46■□□□□ 0.39
Sdf4Q61112 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sdf4Q61112 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sdf4Q61112 Gm10549-201ENSMUST00000097634 450 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Sdf4Q61112 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Sdf4Q61112 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC17.46■□□□□ 0.39
Sdf4Q61112 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Sdf4Q61112 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdf4Q61112 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.38
Sdf4Q61112 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdf4Q61112 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Sdf4Q61112 Rrbp1-201ENSMUST00000016072 5177 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
Sdf4Q61112 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC17.45■□□□□ 0.38
Sdf4Q61112 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC17.45■□□□□ 0.38
Sdf4Q61112 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Sdf4Q61112 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.45■□□□□ 0.38
Sdf4Q61112 Alyref-201ENSMUST00000026125 3527 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Gpr180-201ENSMUST00000022728 1875 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC17.44■□□□□ 0.38
Sdf4Q61112 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC17.44■□□□□ 0.38
Sdf4Q61112 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC17.44■□□□□ 0.38
Sdf4Q61112 AC156016.1-201ENSMUST00000227190 1035 ntBASIC17.44■□□□□ 0.38
Sdf4Q61112 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Sdf4Q61112 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Sdf4Q61112 Klhl25-201ENSMUST00000092073 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Sdf4Q61112 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC17.43■□□□□ 0.38
Sdf4Q61112 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC17.43■□□□□ 0.38
Sdf4Q61112 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Rex1bd-201ENSMUST00000075175 671 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Plekhf2-201ENSMUST00000054776 2977 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Sdf4Q61112 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdf4Q61112 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.42■□□□□ 0.38
Sdf4Q61112 Tigd3-201ENSMUST00000055911 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdf4Q61112 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdf4Q61112 Gm12085-201ENSMUST00000119263 940 ntBASIC17.42■□□□□ 0.38
Sdf4Q61112 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.42■□□□□ 0.38
Sdf4Q61112 Odf3b-204ENSMUST00000227834 930 ntBASIC17.42■□□□□ 0.38
Sdf4Q61112 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Sdf4Q61112 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Sdf4Q61112 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms