Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC17.04■□□□□ 0.32
Col12a1Q60847 9530068E07Rik-202ENSMUST00000109057 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Gm5648-201ENSMUST00000122244 1587 ntBASIC17.04■□□□□ 0.32
Col12a1Q60847 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Gss-203ENSMUST00000130881 1724 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Col12a1Q60847 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Tm4sf4-201ENSMUST00000029377 1496 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Sdcbp-201ENSMUST00000029912 2745 ntAPPRIS ALT1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Col12a1Q60847 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 AC122351.1-201ENSMUST00000220467 126 ntBASIC17.03■□□□□ 0.32
Col12a1Q60847 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC17.03■□□□□ 0.32
Col12a1Q60847 Agfg2-202ENSMUST00000100544 2858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Cmtm3-204ENSMUST00000212081 850 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col12a1Q60847 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Atp9a-211ENSMUST00000178504 3668 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Col12a1Q60847 Pknox2-201ENSMUST00000039674 3632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Col12a1Q60847 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
Col12a1Q60847 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.03■□□□□ 0.32
Col12a1Q60847 Cacfd1-202ENSMUST00000114004 2194 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC17.02■□□□□ 0.32
Col12a1Q60847 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC17.02■□□□□ 0.32
Col12a1Q60847 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.02■□□□□ 0.32
Col12a1Q60847 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 Fzd5-202ENSMUST00000116133 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Col12a1Q60847 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC17.02■□□□□ 0.32
Col12a1Q60847 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col12a1Q60847 2200002J24Rik-201ENSMUST00000013227 333 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.31
Col12a1Q60847 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC17.02■□□□□ 0.31
Col12a1Q60847 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC17.02■□□□□ 0.31
Col12a1Q60847 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC17.02■□□□□ 0.31
Col12a1Q60847 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col12a1Q60847 Kcnip2-202ENSMUST00000079431 2302 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Col12a1Q60847 Kirrel-201ENSMUST00000041732 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Rprl3-201ENSMUST00000157400 290 ntBASIC17.01■□□□□ 0.31
Col12a1Q60847 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 AC122901.1-201ENSMUST00000214203 1790 ntBASIC17.01■□□□□ 0.31
Col12a1Q60847 Hsf1-205ENSMUST00000227478 2084 ntAPPRIS P1 BASIC17.01■□□□□ 0.31
Col12a1Q60847 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Blcap-201ENSMUST00000088494 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Thumpd2-201ENSMUST00000025093 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
Col12a1Q60847 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.01■□□□□ 0.31
Col12a1Q60847 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC17.01■□□□□ 0.31
Col12a1Q60847 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC17.01■□□□□ 0.31
Col12a1Q60847 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Tifa-201ENSMUST00000054483 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Mtch2-205ENSMUST00000136872 2596 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Col12a1Q60847 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col12a1Q60847 Clcn4-206ENSMUST00000210594 2539 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col12a1Q60847 Phf7-203ENSMUST00000226565 1971 ntBASIC17■□□□□ 0.31
Col12a1Q60847 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC17■□□□□ 0.31
Col12a1Q60847 Dlg1-203ENSMUST00000100001 4711 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
Col12a1Q60847 Gm9725-202ENSMUST00000166229 2326 ntTSL 5 BASIC17■□□□□ 0.31
Col12a1Q60847 Thoc3-201ENSMUST00000026990 2335 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col12a1Q60847 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col12a1Q60847 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Col12a1Q60847 Qsox2-201ENSMUST00000036187 2559 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Col12a1Q60847 Gm15920-201ENSMUST00000118998 402 ntBASIC17■□□□□ 0.31
Col12a1Q60847 H2af-ps-201ENSMUST00000119066 295 ntBASIC17■□□□□ 0.31
Col12a1Q60847 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC17■□□□□ 0.31
Col12a1Q60847 Gm12260-201ENSMUST00000122447 411 ntBASIC17■□□□□ 0.31
Col12a1Q60847 Med14-201ENSMUST00000076016 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Col12a1Q60847 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm27397-201ENSMUST00000184997 107 ntBASIC16.99■□□□□ 0.31
Col12a1Q60847 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm11336-201ENSMUST00000118168 334 ntBASIC16.99■□□□□ 0.31
Col12a1Q60847 Xkr6-201ENSMUST00000119973 2963 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm26308-201ENSMUST00000157768 69 ntBASIC16.99■□□□□ 0.31
Col12a1Q60847 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Col12a1Q60847 Gm14140-201ENSMUST00000119999 995 ntBASIC16.99■□□□□ 0.31
Col12a1Q60847 H2-Bl-211ENSMUST00000195838 1105 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms