Protein–RNA interactions for Protein: Q5R1I0

Trav6d-4, T cell receptor alpha variable 6D-4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-4Q5R1I0 Kcns3-201ENSMUST00000055673 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 3110070M22Rik-201ENSMUST00000099148 1123 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Fam69a-201ENSMUST00000031198 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Thegl-202ENSMUST00000117880 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Map6-206ENSMUST00000208605 2275 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Trav6d-4Q5R1I0 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Gm3488-202ENSMUST00000181562 1945 ntAPPRIS P5 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Gm2431-201ENSMUST00000171531 519 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Trav6d-4Q5R1I0 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Gm9954-202ENSMUST00000198686 4725 ntBASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Gm16061-201ENSMUST00000122167 857 ntBASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Rab28-205ENSMUST00000202913 863 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Uchl3-201ENSMUST00000002289 903 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Cmip-202ENSMUST00000166750 2408 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 6330411D24Rik-201ENSMUST00000211105 1568 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
Trav6d-4Q5R1I0 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-4Q5R1I0 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-4Q5R1I0 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-4Q5R1I0 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-4Q5R1I0 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Trav6d-4Q5R1I0 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Ncoa5-203ENSMUST00000122070 3117 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Snx16-202ENSMUST00000099223 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Trav6d-4Q5R1I0 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Tfeb-203ENSMUST00000113284 1974 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Gm13474-201ENSMUST00000122466 815 ntBASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Flg-203ENSMUST00000178695 777 ntAPPRIS P5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Tsnax-202ENSMUST00000212603 2169 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.44□□□□□ -0.1
Trav6d-4Q5R1I0 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms