Protein–RNA interactions for Protein: Q5R1H9

Trav7d-4, T cell receptor alpha variable 7D-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7d-4Q5R1H9 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Trav7d-4Q5R1H9 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Ggnbp2-201ENSMUST00000018547 2478 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Pigp-204ENSMUST00000113914 912 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Areg-201ENSMUST00000031325 1215 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Rpl21-203ENSMUST00000099272 1067 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 2410004B18Rik-201ENSMUST00000039571 1547 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Hsd3b2-201ENSMUST00000107021 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Trav7d-4Q5R1H9 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Prmt1-203ENSMUST00000207370 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Bag1-202ENSMUST00000108089 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Gm16499-203ENSMUST00000204633 2177 ntBASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Smox-205ENSMUST00000110182 985 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Ankrd9-205ENSMUST00000142012 1226 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Gas5-217ENSMUST00000161005 430 ntTSL 5 BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Flt1-203ENSMUST00000110529 6292 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Slc39a7-201ENSMUST00000025186 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Mlf2-201ENSMUST00000032214 1451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Trav7d-4Q5R1H9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Wrb-201ENSMUST00000023913 2495 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Nr2e1-201ENSMUST00000019938 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 D630002J18Rik-201ENSMUST00000181854 1115 ntBASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Gtsf1-201ENSMUST00000023129 819 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Pld2-203ENSMUST00000108557 3655 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Chst5-201ENSMUST00000034430 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Gm11620-201ENSMUST00000118770 1845 ntBASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Rgs19-202ENSMUST00000108769 1460 ntTSL 2 BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Trav7d-4Q5R1H9 Emc10-201ENSMUST00000118515 1662 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav7d-4Q5R1H9 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav7d-4Q5R1H9 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Trav7d-4Q5R1H9 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Grwd1-201ENSMUST00000107723 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Taf3-203ENSMUST00000114907 695 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Gm11837-201ENSMUST00000136992 876 ntTSL 2 BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Snhg20-202ENSMUST00000149822 593 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav7d-4Q5R1H9 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC13.14□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms