Protein–RNA interactions for Protein: Q5R1H8

Trav8d-1, T cell receptor alpha variable 8D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8d-1Q5R1H8 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Nespas-201ENSMUST00000143738 1083 ntBASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trav8d-1Q5R1H8 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Dancr-204ENSMUST00000132389 2347 ntBASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Tmem203-201ENSMUST00000104998 854 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Idnk-204ENSMUST00000226010 1898 ntBASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC14.12□□□□□ -0.15
Trav8d-1Q5R1H8 2210016L21Rik-201ENSMUST00000031538 2607 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Eif2ak3-201ENSMUST00000034093 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Hmx2-202ENSMUST00000183219 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Ier2-201ENSMUST00000060427 1522 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Zmynd19-201ENSMUST00000028350 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Hsp25-ps1-201ENSMUST00000109187 630 ntBASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 H2-DMa-201ENSMUST00000042121 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trav8d-1Q5R1H8 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Gm26596-201ENSMUST00000180464 2655 ntBASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Gm8309-201ENSMUST00000206627 1448 ntBASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Sarnp-201ENSMUST00000105230 918 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Gm26971-201ENSMUST00000182423 1072 ntBASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Nr2c2ap-202ENSMUST00000211898 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Cetn3-201ENSMUST00000022009 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Gm6365-201ENSMUST00000054711 744 ntBASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trav8d-1Q5R1H8 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms