Protein–RNA interactions for Protein: Q5R1A3

Trdv4, T cell receptor delta variable 4 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdv4Q5R1A3 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Gm10698-201ENSMUST00000182663 604 ntBASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Glra1-202ENSMUST00000102716 2390 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Apba3-201ENSMUST00000057798 2106 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trdv4Q5R1A3 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Fam171a1-204ENSMUST00000115099 4149 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Acss2-202ENSMUST00000065973 2876 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Camsap2-201ENSMUST00000048309 7823 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 H2-D1-202ENSMUST00000172785 2102 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Gm4974-201ENSMUST00000209974 875 ntBASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Trdv4Q5R1A3 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Gpr20-201ENSMUST00000064166 2144 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Pick1-206ENSMUST00000166155 1699 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Gm13168-201ENSMUST00000121771 632 ntBASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trdv4Q5R1A3 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Trdv4Q5R1A3 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Fbxl15-201ENSMUST00000026256 1348 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Gm10517-202ENSMUST00000192970 758 ntBASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Gm45774-201ENSMUST00000211992 2665 ntBASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Csnk2a2-203ENSMUST00000212214 6779 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Arid1a-205ENSMUST00000145664 8187 ntAPPRIS ALT2 TSL 2 BASIC14.2□□□□□ -0.14
Trdv4Q5R1A3 Jmy-201ENSMUST00000065537 8776 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Gm19721-201ENSMUST00000195284 1764 ntBASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Icam2-201ENSMUST00000001055 1282 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trdv4Q5R1A3 Smim1-212ENSMUST00000146543 839 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms