Protein–RNA interactions for Protein: Q56A07

Scn2b, Sodium channel subunit beta-2, mousemouse

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn2bQ56A07 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Scn2bQ56A07 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Gm37856-201ENSMUST00000191634 999 ntBASIC17.06■□□□□ 0.32
Scn2bQ56A07 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Lrp3-201ENSMUST00000118444 3877 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
Scn2bQ56A07 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
Scn2bQ56A07 St3gal2-201ENSMUST00000034197 4396 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Alcam-206ENSMUST00000168071 878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Rps16-201ENSMUST00000082134 1109 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Plekhh3-206ENSMUST00000164474 3010 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Ikzf1-203ENSMUST00000065433 4697 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Nek9-201ENSMUST00000040992 5386 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Scn2bQ56A07 Dio3-201ENSMUST00000097228 1449 ntBASIC17.04■□□□□ 0.32
Scn2bQ56A07 Arntl-204ENSMUST00000210238 2976 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Gm10418-201ENSMUST00000100943 576 ntBASIC17.04■□□□□ 0.32
Scn2bQ56A07 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Gm27275-201ENSMUST00000184318 272 ntBASIC17.04■□□□□ 0.32
Scn2bQ56A07 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Prdm11-201ENSMUST00000111272 3012 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
Scn2bQ56A07 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Gm21596-201ENSMUST00000178049 1316 ntBASIC17.03■□□□□ 0.32
Scn2bQ56A07 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Gm29241-201ENSMUST00000189260 1096 ntBASIC17.03■□□□□ 0.32
Scn2bQ56A07 Gm44878-201ENSMUST00000205812 1295 ntBASIC17.03■□□□□ 0.32
Scn2bQ56A07 Rpl18-202ENSMUST00000209287 1027 ntTSL 3 BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Fam50b-201ENSMUST00000039605 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Scn2bQ56A07 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Paqr3-201ENSMUST00000069453 1375 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Col15a1-201ENSMUST00000082303 5102 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Pcmt1-202ENSMUST00000159917 2491 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 1110065P20Rik-203ENSMUST00000137769 659 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Tpsb2-201ENSMUST00000069616 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Nsun5-201ENSMUST00000000940 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Scn2bQ56A07 Senp2-201ENSMUST00000023561 4499 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn2bQ56A07 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
Scn2bQ56A07 Zmiz1-201ENSMUST00000007961 5397 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
Scn2bQ56A07 Sgsm1-204ENSMUST00000112325 2274 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Gm45412-201ENSMUST00000210217 2275 ntBASIC17.01■□□□□ 0.31
Scn2bQ56A07 Kctd9-205ENSMUST00000152243 2528 ntTSL 2 BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 1700101I19Rik-202ENSMUST00000186712 510 ntBASIC17.01■□□□□ 0.31
Scn2bQ56A07 Nme4-201ENSMUST00000025007 912 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
Scn2bQ56A07 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
Scn2bQ56A07 Wasf1-202ENSMUST00000105509 2719 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
Scn2bQ56A07 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Gm16401-202ENSMUST00000197463 2074 ntBASIC17■□□□□ 0.31
Scn2bQ56A07 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Npnt-202ENSMUST00000042744 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
Scn2bQ56A07 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC17■□□□□ 0.31
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms