Protein–RNA interactions for Protein: Q3V3V9

Carmil2, Capping protein, Arp2/3 and myosin-I linker protein 2, mousemouse

Predictions only

Length 1,296 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Carmil2Q3V3V9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Gm12382-201ENSMUST00000122005 922 ntBASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Hint1-201ENSMUST00000020504 636 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 AC166341.7-201ENSMUST00000221698 126 ntBASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Cldn24-201ENSMUST00000079639 663 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Zfp697-201ENSMUST00000056096 5166 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
Carmil2Q3V3V9 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 AC124581.1-201ENSMUST00000225416 1399 ntBASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Pld6-202ENSMUST00000125307 948 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Dlx3-201ENSMUST00000092768 2607 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 AC108858.1-201ENSMUST00000228461 1498 ntBASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Actr3-201ENSMUST00000027579 2554 ntAPPRIS P1 TSL 5 BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Il17re-203ENSMUST00000101065 1973 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
Carmil2Q3V3V9 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Timm23-208ENSMUST00000226683 750 ntBASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Otx2os1-204ENSMUST00000227221 751 ntBASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Spsb2-202ENSMUST00000052727 1219 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Gm10273-201ENSMUST00000092511 1126 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Rock2-201ENSMUST00000020904 7644 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Zc3hav1l-201ENSMUST00000058524 6536 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
Carmil2Q3V3V9 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Fbxo33-201ENSMUST00000043204 3688 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Gm3764-209ENSMUST00000181550 1093 ntTSL 3 BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Psma6-201ENSMUST00000021412 1042 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Carmil2Q3V3V9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Zbtb24-201ENSMUST00000080771 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Gm7284-201ENSMUST00000131667 944 ntBASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Smarca4-202ENSMUST00000098948 6376 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Fam159b-201ENSMUST00000043061 1310 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Nfib-204ENSMUST00000107246 3075 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Tril-201ENSMUST00000127748 5363 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC19.18■□□□□ 0.66
Carmil2Q3V3V9 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Hmces-201ENSMUST00000032141 1464 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Gm43514-201ENSMUST00000198852 424 ntBASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Carmil2Q3V3V9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms