Protein–RNA interactions for Protein: Q3UY51

Lrrc55, Leucine-rich repeat-containing protein 55, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrrc55Q3UY51 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Ndufb11-201ENSMUST00000116621 908 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Gm9694-201ENSMUST00000193347 1189 ntBASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Rplp2-201ENSMUST00000084434 964 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Syncrip-201ENSMUST00000069221 9450 ntAPPRIS P3 TSL 1 (best) BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Nrxn1-217ENSMUST00000174337 3021 ntTSL 5 BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
Lrrc55Q3UY51 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Lce1j-201ENSMUST00000107304 420 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Gm22697-201ENSMUST00000175194 63 ntBASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Tbpl1-201ENSMUST00000095794 1195 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Rab40c-207ENSMUST00000167626 2506 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Cklf-208ENSMUST00000212433 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
Lrrc55Q3UY51 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Gm9103-201ENSMUST00000119371 405 ntBASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Gm18101-201ENSMUST00000215769 548 ntBASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 AC134329.2-201ENSMUST00000217897 428 ntBASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Eepd1-201ENSMUST00000040677 2723 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Glrx2-210ENSMUST00000185362 3337 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC19.17■□□□□ 0.66
Lrrc55Q3UY51 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
Lrrc55Q3UY51 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Muc2-203ENSMUST00000179227 399 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
Lrrc55Q3UY51 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
Lrrc55Q3UY51 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.66
Lrrc55Q3UY51 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Cyr61-201ENSMUST00000029846 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Gm13816-201ENSMUST00000152230 715 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 AC154471.1-201ENSMUST00000224418 436 ntBASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Nit1-202ENSMUST00000111295 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Bean1-203ENSMUST00000167633 3275 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Slc43a1-202ENSMUST00000111624 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
Lrrc55Q3UY51 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Lrrc55Q3UY51 Il17rb-202ENSMUST00000122205 2094 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc55Q3UY51 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC19.13■□□□□ 0.65
Lrrc55Q3UY51 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 76,532 protein–RNA pairs in 18.5 ms