Protein–RNA interactions for Protein: Q3USH1

Fam196a, Protein FAM196A, mousemouse

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fam196aQ3USH1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Kirrel3-202ENSMUST00000115148 2851 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Gm42900-201ENSMUST00000197184 2167 ntBASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Foxp1-220ENSMUST00000176565 3727 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Fam196aQ3USH1 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Ppp1r16a-201ENSMUST00000037551 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Golga7-202ENSMUST00000121783 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Bmpr1b-203ENSMUST00000106230 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44357-201ENSMUST00000195897 142 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm19658-201ENSMUST00000196231 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44367-201ENSMUST00000196836 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44350-201ENSMUST00000197197 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44390-201ENSMUST00000197533 144 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44313-201ENSMUST00000198018 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44486-201ENSMUST00000198508 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44454-201ENSMUST00000198541 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44314-201ENSMUST00000199263 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44394-201ENSMUST00000199558 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44484-201ENSMUST00000199873 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44466-201ENSMUST00000200264 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm44359-201ENSMUST00000200671 138 ntBASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 2300002M23Rik-201ENSMUST00000044326 1290 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Pex11b-202ENSMUST00000118557 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Zmiz2-201ENSMUST00000012612 4199 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Fam196aQ3USH1 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 4930471E19Rik-201ENSMUST00000219022 1514 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Rela-201ENSMUST00000025867 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Rprl3-201ENSMUST00000157400 290 ntBASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Ndfip2-206ENSMUST00000181969 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Fam196aQ3USH1 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.34
Fam196aQ3USH1 Neto2-205ENSMUST00000216286 2932 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Tgds-204ENSMUST00000228543 1594 ntBASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 AC153794.1-201ENSMUST00000169148 126 ntBASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Mir5126-201ENSMUST00000175513 77 ntBASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Gm26768-201ENSMUST00000181097 966 ntTSL 5 BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Gm13830-205ENSMUST00000201195 1155 ntBASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Ppp1r27-201ENSMUST00000026121 771 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Src-203ENSMUST00000109529 2020 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Fam196aQ3USH1 Tagln-201ENSMUST00000034590 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Tlcd1-202ENSMUST00000098545 2897 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Trim58-201ENSMUST00000075084 2192 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Cwh43-202ENSMUST00000065543 2316 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Gm20675-201ENSMUST00000175861 338 ntTSL 3 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Msh3-205ENSMUST00000187424 666 ntTSL 2 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Gm32050-201ENSMUST00000209793 638 ntTSL 3 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Epc1-202ENSMUST00000050542 565 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Mast4-205ENSMUST00000166726 5968 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Sim1-202ENSMUST00000219436 1687 ntTSL 5 BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Zdhhc13-201ENSMUST00000118927 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Fam196aQ3USH1 Ehmt2-201ENSMUST00000013931 4026 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Fam196aQ3USH1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms