Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cks1brtQ3UNC9 Gclc-201ENSMUST00000034905 3423 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Wbp1-201ENSMUST00000032111 1419 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Anapc2-201ENSMUST00000028341 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Cetn4-203ENSMUST00000102955 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Mipep-201ENSMUST00000063562 3015 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Leprotl1-201ENSMUST00000033910 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cks1brtQ3UNC9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Lsm6-201ENSMUST00000051867 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Slain1-201ENSMUST00000069443 2863 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Qtrt1-201ENSMUST00000002902 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Krtap28-10-201ENSMUST00000188323 957 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Crem-234ENSMUST00000154470 1996 ntTSL 5 BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cks1brtQ3UNC9 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 F830208F22Rik-202ENSMUST00000143732 2891 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Hpca-204ENSMUST00000116444 1847 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Neu1-201ENSMUST00000007253 2474 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Gm16401-202ENSMUST00000197463 2074 ntBASIC12.46□□□□□ -0.42
Cks1brtQ3UNC9 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Itpkc-201ENSMUST00000003850 3247 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Pcf11-204ENSMUST00000208058 461 ntTSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Wnt1-201ENSMUST00000023734 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Slc5a10-203ENSMUST00000148584 2049 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Dstn-201ENSMUST00000103172 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Cks1brtQ3UNC9 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Kmt5b-216ENSMUST00000176926 1551 ntAPPRIS ALT2 TSL 5 BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Gm7860-201ENSMUST00000121190 879 ntBASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Hotairm1-201ENSMUST00000129546 409 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Gm37805-201ENSMUST00000192612 1094 ntBASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Gm43566-201ENSMUST00000196851 808 ntBASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Cks1brtQ3UNC9 Slc35a2-209ENSMUST00000208397 1374 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Cks1brtQ3UNC9 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Cks1brtQ3UNC9 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms