Protein–RNA interactions for Protein: Q3UBX0

Tmem109, Transmembrane protein 109, mousemouse

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tmem109Q3UBX0 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 AL590614.2-201ENSMUST00000225374 1937 ntBASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
Tmem109Q3UBX0 Sphk1-206ENSMUST00000106388 1891 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Gabra5-202ENSMUST00000206382 2607 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Gm24841-201ENSMUST00000158676 357 ntBASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 A230065N10Rik-201ENSMUST00000172178 1028 ntBASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Tmem109Q3UBX0 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Gm18336-201ENSMUST00000180787 2298 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Smc6-201ENSMUST00000020931 5603 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Pnpt1-201ENSMUST00000020756 2707 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Spata18-202ENSMUST00000071077 1978 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Gm27275-201ENSMUST00000184318 272 ntBASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Rara-202ENSMUST00000107473 3238 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Tmem109Q3UBX0 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem109Q3UBX0 Lrch3-201ENSMUST00000023491 5536 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem109Q3UBX0 Mid1ip1-202ENSMUST00000115524 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem109Q3UBX0 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem109Q3UBX0 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Tmem109Q3UBX0 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Shc1-202ENSMUST00000094378 2617 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Sufu-202ENSMUST00000111867 1747 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Hivep3-201ENSMUST00000084306 2973 ntBASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Gm17509-201ENSMUST00000165680 2375 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Mafg-201ENSMUST00000058162 4923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Tmem109Q3UBX0 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Irf3-213ENSMUST00000209066 1712 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Gm10517-202ENSMUST00000192970 758 ntBASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Impdh1-202ENSMUST00000159124 2600 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Stk33-201ENSMUST00000090414 2221 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Tmem109Q3UBX0 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Pdss2-201ENSMUST00000095725 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Gm20049-201ENSMUST00000219950 730 ntBASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Fbxl21-203ENSMUST00000121871 1963 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
Tmem109Q3UBX0 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
Tmem109Q3UBX0 A630072M18Rik-201ENSMUST00000190567 5410 ntBASIC19.22■□□□□ 0.67
Tmem109Q3UBX0 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem109Q3UBX0 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
Tmem109Q3UBX0 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Tmem109Q3UBX0 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 76,532 protein–RNA pairs in 47.5 ms