Protein–RNA interactions for Protein: Q3U3V8

Xrra1, X-ray radiation resistance-associated protein 1, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrra1Q3U3V8 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Gm37166-201ENSMUST00000195473 2474 ntBASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC16.46■□□□□ 0.23
Xrra1Q3U3V8 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Xrra1Q3U3V8 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Aspscr1-204ENSMUST00000106159 1615 ntTSL 5 BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC16.45■□□□□ 0.22
Xrra1Q3U3V8 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Uso1-204ENSMUST00000202155 3707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Wisp2-201ENSMUST00000029188 1719 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Dok7-202ENSMUST00000101298 2443 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Xrra1Q3U3V8 Glcci1-201ENSMUST00000064285 6200 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Foxp4-204ENSMUST00000113265 3999 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Pard3-209ENSMUST00000160272 5815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Wdr33-202ENSMUST00000082319 1152 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Pex6-201ENSMUST00000002840 3200 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Xrra1Q3U3V8 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Bcor-206ENSMUST00000124033 6785 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Xrra1Q3U3V8 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Csnk1g3-201ENSMUST00000069597 4394 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Gm10532-201ENSMUST00000181913 2301 ntTSL 2 BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC16.41■□□□□ 0.22
Xrra1Q3U3V8 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34.5 ms