Protein–RNA interactions for Protein: Q1XH17

Trim72, Tripartite motif-containing protein 72, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim72Q1XH17 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Tnfsf14-201ENSMUST00000005976 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Trim72Q1XH17 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Eif4enif1-203ENSMUST00000110049 3614 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Zfyve19-201ENSMUST00000090174 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 2810459M11Rik-202ENSMUST00000165824 3331 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Dkk4-201ENSMUST00000033936 1315 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Scamp4-201ENSMUST00000079883 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Mapk7-203ENSMUST00000108714 3069 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Trim72Q1XH17 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim72Q1XH17 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Trim72Q1XH17 Fam71e1-202ENSMUST00000205359 1307 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
Trim72Q1XH17 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Cds2-202ENSMUST00000103181 8396 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Stox1-202ENSMUST00000133371 3510 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 Kif7-202ENSMUST00000178048 4524 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Trim72Q1XH17 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC18.32■□□□□ 0.52
Trim72Q1XH17 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Grk6-201ENSMUST00000001115 2994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Gm13181-201ENSMUST00000120117 1069 ntBASIC18.32■□□□□ 0.52
Trim72Q1XH17 Gm7638-201ENSMUST00000121348 967 ntBASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Gm21814-202ENSMUST00000203277 873 ntBASIC18.32■□□□□ 0.52
Trim72Q1XH17 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Trim72Q1XH17 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Nr1h2-213ENSMUST00000167197 1944 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Adra2a-201ENSMUST00000036700 3801 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gjb3-201ENSMUST00000046532 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Nfkbib-201ENSMUST00000032815 2061 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Tmem131-208ENSMUST00000194563 6698 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Mir5122-201ENSMUST00000175004 89 ntBASIC18.31■□□□□ 0.52
Trim72Q1XH17 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Prss54-205ENSMUST00000213096 1501 ntAPPRIS P3 TSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Gapvd1-203ENSMUST00000113099 5758 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Trim72Q1XH17 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Trim72Q1XH17 U2af2-209ENSMUST00000209099 2088 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim72Q1XH17 Tfap2a-209ENSMUST00000225180 1828 ntBASIC18.3■□□□□ 0.52
Trim72Q1XH17 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim72Q1XH17 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim72Q1XH17 Gm43338-201ENSMUST00000198617 2223 ntBASIC18.3■□□□□ 0.52
Trim72Q1XH17 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
Trim72Q1XH17 Inpp4a-201ENSMUST00000027287 5691 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Trim72Q1XH17 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms