Protein–RNA interactions for Protein: Q0VF58

Col19a1, Collagen alpha-1(XIX) chain, mousemouse

Predictions only

Length 1,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col19a1Q0VF58 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Rnf121-202ENSMUST00000096639 2249 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Lancl2-201ENSMUST00000050077 2509 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Sec61b-201ENSMUST00000065678 564 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Olfr632-201ENSMUST00000098189 954 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Map2k1-201ENSMUST00000005066 2436 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
Col19a1Q0VF58 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Gm15165-201ENSMUST00000118140 502 ntBASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Rprl3-201ENSMUST00000157400 290 ntBASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.36■□□□□ 0.53
Col19a1Q0VF58 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Etfrf1-204ENSMUST00000111723 842 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Rbmx-206ENSMUST00000143310 1296 ntTSL 5 BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Col19a1Q0VF58 BC021767-201ENSMUST00000126387 1716 ntBASIC18.35■□□□□ 0.53
Col19a1Q0VF58 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Arfrp1-209ENSMUST00000170190 2483 ntTSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Dnaja4-201ENSMUST00000070070 3003 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Gm9885-202ENSMUST00000186234 2209 ntBASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Ahsa1-201ENSMUST00000021425 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Gm13312-201ENSMUST00000119631 718 ntBASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Dus1l-202ENSMUST00000106133 1762 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Col19a1Q0VF58 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC18.33■□□□□ 0.53
Col19a1Q0VF58 Gm38160-201ENSMUST00000193090 2499 ntBASIC18.33■□□□□ 0.53
Col19a1Q0VF58 Matn4-202ENSMUST00000103104 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Col19a1Q0VF58 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Gm13186-201ENSMUST00000118031 316 ntBASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Hsf1-204ENSMUST00000226872 2104 ntBASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Slc39a5-202ENSMUST00000167859 2025 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 AC163637.2-201ENSMUST00000213826 1945 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Sema6d-204ENSMUST00000078621 6372 ntTSL 5 BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
Col19a1Q0VF58 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Man2c1os-201ENSMUST00000125333 1910 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Iars2-203ENSMUST00000110975 2801 ntTSL 5 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC18.32■□□□□ 0.52
Col19a1Q0VF58 Hsf1-207ENSMUST00000228371 2102 ntBASIC18.32■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 25.8 ms