Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Bpifb4-203ENSMUST00000109759 2115 ntAPPRIS P2 TSL 5 BASIC14.31□□□□□ -0.12
Tff1Q08423 Gm12896-201ENSMUST00000118430 226 ntBASIC14.31□□□□□ -0.12
Tff1Q08423 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Smn1-202ENSMUST00000091321 223 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Snx25-203ENSMUST00000110378 3445 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Tff1Q08423 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
Tff1Q08423 Slc25a26-201ENSMUST00000061118 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC14.31□□□□□ -0.12
Tff1Q08423 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Tff1Q08423 Zfp92-202ENSMUST00000086470 2050 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Zfp277-201ENSMUST00000069637 2188 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
Tff1Q08423 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.3□□□□□ -0.12
Tff1Q08423 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC14.3□□□□□ -0.12
Tff1Q08423 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC14.3□□□□□ -0.12
Tff1Q08423 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Tff1Q08423 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC14.3□□□□□ -0.12
Tff1Q08423 Nsg1-204ENSMUST00000201363 820 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
Tff1Q08423 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tff1Q08423 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Tff1Q08423 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Tff1Q08423 Hapln2-201ENSMUST00000005014 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Sorcs3-201ENSMUST00000078880 5634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.29□□□□□ -0.12
Tff1Q08423 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Gm11627-202ENSMUST00000107081 818 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tff1Q08423 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC14.29□□□□□ -0.12
Tff1Q08423 Rpl38-202ENSMUST00000082092 345 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tff1Q08423 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Mpst-201ENSMUST00000043865 1413 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Arpc1a-201ENSMUST00000031625 1632 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Nfib-205ENSMUST00000107247 3267 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Tff1Q08423 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC14.29□□□□□ -0.12
Tff1Q08423 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Nxnl1-201ENSMUST00000048243 2285 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
Tff1Q08423 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Tff1Q08423 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Nudt4-201ENSMUST00000020217 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Gm2399-201ENSMUST00000104944 225 ntBASIC14.28□□□□□ -0.12
Tff1Q08423 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.28□□□□□ -0.12
Tff1Q08423 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tff1Q08423 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Tff1Q08423 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Arhgap42-203ENSMUST00000183182 1458 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC14.28□□□□□ -0.12
Tff1Q08423 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tff1Q08423 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Adgrb2-204ENSMUST00000106015 4982 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Tff1Q08423 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Tff1Q08423 Gm43548-201ENSMUST00000197139 2353 ntBASIC14.27□□□□□ -0.12
Tff1Q08423 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tff1Q08423 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.27□□□□□ -0.12
Tff1Q08423 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC14.27□□□□□ -0.12
Tff1Q08423 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tff1Q08423 Gm26917-202ENSMUST00000192833 3329 ntBASIC14.27□□□□□ -0.12
Tff1Q08423 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC14.27□□□□□ -0.12
Tff1Q08423 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Tff1Q08423 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Tff1Q08423 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Zdhhc12-202ENSMUST00000102865 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Tff1Q08423 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 20.6 ms