Protein–RNA interactions for Protein: P97459

Npas1, Neuronal PAS domain-containing protein 1, mousemouse

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas1P97459 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Arrb2-205ENSMUST00000108568 1777 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
Npas1P97459 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
Npas1P97459 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC14.45□□□□□ -0.1
Npas1P97459 AC164441.1-202ENSMUST00000223430 442 ntTSL 2 BASIC14.45□□□□□ -0.1
Npas1P97459 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Npas1P97459 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC14.45□□□□□ -0.1
Npas1P97459 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Flot1-201ENSMUST00000001569 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
Npas1P97459 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
Npas1P97459 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC14.44□□□□□ -0.1
Npas1P97459 Idnk-204ENSMUST00000226010 1898 ntBASIC14.44□□□□□ -0.1
Npas1P97459 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
Npas1P97459 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Gm11650-201ENSMUST00000141271 1145 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Gm12063-201ENSMUST00000148087 715 ntTSL 2 BASIC14.44□□□□□ -0.1
Npas1P97459 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC14.44□□□□□ -0.1
Npas1P97459 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Npas1P97459 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
Npas1P97459 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
Npas1P97459 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
Npas1P97459 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Npas1P97459 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Gdf1-201ENSMUST00000207684 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Npas1P97459 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC14.43□□□□□ -0.1
Npas1P97459 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Crnde-206ENSMUST00000179421 773 ntTSL 3 BASIC14.43□□□□□ -0.1
Npas1P97459 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Spg21-201ENSMUST00000034955 2680 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
Npas1P97459 Pde4a-201ENSMUST00000003395 2524 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Npas1P97459 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.42□□□□□ -0.1
Npas1P97459 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC14.42□□□□□ -0.1
Npas1P97459 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.42□□□□□ -0.1
Npas1P97459 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.42□□□□□ -0.1
Npas1P97459 Carmil2-201ENSMUST00000062574 2526 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Npas1P97459 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC14.42□□□□□ -0.1
Npas1P97459 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC14.42□□□□□ -0.1
Npas1P97459 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC14.42□□□□□ -0.1
Npas1P97459 AC160393.1-201ENSMUST00000218378 1279 ntBASIC14.42□□□□□ -0.1
Npas1P97459 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 16.8 ms