Protein–RNA interactions for Protein: P97445

Cacna1a, Voltage-dependent P/Q-type calcium channel subunit alpha-1A, mousemouse

Predictions only

Length 2,368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cacna1aP97445 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1aP97445 Ccnd3-218ENSMUST00000183177 2060 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
Cacna1aP97445 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Cacna1aP97445 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC15.83■□□□□ 0.13
Cacna1aP97445 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Gm10576-201ENSMUST00000191927 825 ntBASIC15.83■□□□□ 0.12
Cacna1aP97445 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Cacna1aP97445 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Gm5784-201ENSMUST00000179344 2478 ntBASIC15.83■□□□□ 0.12
Cacna1aP97445 Myrip-201ENSMUST00000048121 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Prss16-201ENSMUST00000006341 2155 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Cacna1aP97445 Gm16191-201ENSMUST00000141445 520 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Gm43575-201ENSMUST00000196420 516 ntBASIC15.83■□□□□ 0.12
Cacna1aP97445 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Cacna1aP97445 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Cacna1aP97445 Man1a-203ENSMUST00000105470 2847 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Gm37374-201ENSMUST00000194954 1829 ntBASIC15.82■□□□□ 0.12
Cacna1aP97445 Cnbp-208ENSMUST00000204653 2175 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Ccdc69-201ENSMUST00000055040 1402 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Bex3-204ENSMUST00000178632 933 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Mboat1-201ENSMUST00000047311 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Tesmin-201ENSMUST00000025840 2234 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Hmg20b-204ENSMUST00000122993 1502 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Efnb2-201ENSMUST00000001319 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Cacna1aP97445 Gm18195-201ENSMUST00000207604 706 ntBASIC15.82■□□□□ 0.12
Cacna1aP97445 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Elmo2-204ENSMUST00000103088 3052 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Cacna1aP97445 Ak2-202ENSMUST00000102604 1781 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Spg21-202ENSMUST00000213957 1302 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC15.81■□□□□ 0.12
Cacna1aP97445 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1aP97445 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.81■□□□□ 0.12
Cacna1aP97445 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC15.81■□□□□ 0.12
Cacna1aP97445 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Prdm8-202ENSMUST00000210477 3316 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Cacna1aP97445 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Cacna1aP97445 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 AC153889.1-201ENSMUST00000219257 330 ntBASIC15.8■□□□□ 0.12
Cacna1aP97445 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Wnt10b-207ENSMUST00000228594 1510 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Larp4b-204ENSMUST00000188939 2658 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Fgf17-201ENSMUST00000022697 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Rpap3-201ENSMUST00000023104 2260 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Kcng3-201ENSMUST00000051482 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Fst-202ENSMUST00000223640 2612 ntBASIC15.8■□□□□ 0.12
Cacna1aP97445 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 9330171B17Rik-201ENSMUST00000035939 2073 ntBASIC15.8■□□□□ 0.12
Cacna1aP97445 Hsd17b1-201ENSMUST00000019445 1339 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 AC154855.1-201ENSMUST00000227353 1458 ntBASIC15.8■□□□□ 0.12
Cacna1aP97445 Itsn1-201ENSMUST00000056482 5364 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Cnot11-201ENSMUST00000003219 3162 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Cct4-201ENSMUST00000020562 1634 ntTSL 5 BASIC15.8■□□□□ 0.12
Cacna1aP97445 Ppil3-204ENSMUST00000117069 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Cacna1aP97445 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Gm13884-201ENSMUST00000118103 829 ntBASIC15.79■□□□□ 0.12
Cacna1aP97445 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Npw-202ENSMUST00000213213 531 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Cacna1aP97445 Fbxo30-201ENSMUST00000070300 2492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 BC017158-201ENSMUST00000033044 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Cacna1aP97445 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 26.6 ms