Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Gm20033-201ENSMUST00000180470 572 ntTSL 3 BASIC18.66■□□□□ 0.58
CiitaP79621 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC18.66■□□□□ 0.58
CiitaP79621 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC18.66■□□□□ 0.58
CiitaP79621 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC18.66■□□□□ 0.58
CiitaP79621 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CiitaP79621 Adsl-204ENSMUST00000164806 1595 ntTSL 5 BASIC18.66■□□□□ 0.58
CiitaP79621 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Zpbp2-202ENSMUST00000081033 1300 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CiitaP79621 Hmbox1-203ENSMUST00000175744 1771 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC18.65■□□□□ 0.58
CiitaP79621 Gm21559-201ENSMUST00000220638 855 ntBASIC18.65■□□□□ 0.58
CiitaP79621 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Krtap1-5-201ENSMUST00000054532 1041 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CiitaP79621 Gm8587-201ENSMUST00000076538 843 ntBASIC18.65■□□□□ 0.58
CiitaP79621 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
CiitaP79621 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Grk2-202ENSMUST00000088737 3376 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CiitaP79621 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC18.65■□□□□ 0.58
CiitaP79621 Diras1-201ENSMUST00000055125 2953 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC18.64■□□□□ 0.57
CiitaP79621 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Tmem60-201ENSMUST00000115259 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CiitaP79621 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC18.64■□□□□ 0.57
CiitaP79621 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CiitaP79621 Smim3-201ENSMUST00000042710 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Dlg1-205ENSMUST00000115201 3248 ntTSL 5 BASIC18.64■□□□□ 0.57
CiitaP79621 Gm11748-201ENSMUST00000153825 1498 ntTSL 2 BASIC18.64■□□□□ 0.57
CiitaP79621 Kansl1l-201ENSMUST00000068168 4459 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
CiitaP79621 Actl10-202ENSMUST00000226583 1501 ntBASIC18.64■□□□□ 0.57
CiitaP79621 Slit3-201ENSMUST00000069837 5228 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CiitaP79621 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CiitaP79621 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Gm5577-203ENSMUST00000153372 815 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Gm3272-201ENSMUST00000181181 1229 ntBASIC18.63■□□□□ 0.57
CiitaP79621 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC18.63■□□□□ 0.57
CiitaP79621 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Cdkn2c-201ENSMUST00000063531 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Gm10566-201ENSMUST00000086739 996 ntBASIC18.63■□□□□ 0.57
CiitaP79621 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CiitaP79621 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC18.63■□□□□ 0.57
CiitaP79621 Nkd1-201ENSMUST00000034086 3035 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CiitaP79621 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Ube2q2-201ENSMUST00000059555 3456 ntAPPRIS P3 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
CiitaP79621 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
CiitaP79621 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC18.62■□□□□ 0.57
CiitaP79621 Zcchc6-207ENSMUST00000225576 2499 ntBASIC18.62■□□□□ 0.57
CiitaP79621 Slc25a47-202ENSMUST00000221080 1890 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Brpf1-204ENSMUST00000113122 4773 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CiitaP79621 D3Ertd751e-205ENSMUST00000120167 773 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
CiitaP79621 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC18.61■□□□□ 0.57
CiitaP79621 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Gm6728-201ENSMUST00000178117 1065 ntBASIC18.61■□□□□ 0.57
CiitaP79621 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC18.61■□□□□ 0.57
CiitaP79621 D230030E09Rik-201ENSMUST00000222459 884 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Nkx2-9-201ENSMUST00000072631 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC18.61■□□□□ 0.57
CiitaP79621 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC18.61■□□□□ 0.57
CiitaP79621 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Ythdf3-201ENSMUST00000108345 5102 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
CiitaP79621 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
CiitaP79621 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 BC034090-204ENSMUST00000186156 4873 ntAPPRIS P5 TSL 5 BASIC18.6■□□□□ 0.57
CiitaP79621 Slc2a13-202ENSMUST00000109283 6536 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
CiitaP79621 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
Retrieved 100 of 76,532 protein–RNA pairs in 23.9 ms