Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Lat-201ENSMUST00000032997 1235 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Agpat3-202ENSMUST00000105387 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Adnp-202ENSMUST00000088001 4932 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Vps9d1-203ENSMUST00000122363 2952 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
Six5P70178 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six5P70178 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC16.1■□□□□ 0.17
Six5P70178 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC16.1■□□□□ 0.17
Six5P70178 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Gm38027-201ENSMUST00000192315 235 ntBASIC16.1■□□□□ 0.17
Six5P70178 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.1■□□□□ 0.17
Six5P70178 Gm21814-202ENSMUST00000203277 873 ntBASIC16.1■□□□□ 0.17
Six5P70178 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Tpsg1-201ENSMUST00000024999 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
Six5P70178 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Sh3glb1-202ENSMUST00000198254 5945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC16.1■□□□□ 0.17
Six5P70178 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 Wdr90-205ENSMUST00000176923 5666 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
Six5P70178 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
Six5P70178 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Pigu-201ENSMUST00000077626 1636 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Gm45606-201ENSMUST00000209836 2795 ntBASIC16.09■□□□□ 0.17
Six5P70178 Arpc4-201ENSMUST00000156898 2270 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Lrriq4-203ENSMUST00000172350 1797 ntAPPRIS P3 TSL 5 BASIC16.09■□□□□ 0.17
Six5P70178 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Cenps-202ENSMUST00000105695 544 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.09■□□□□ 0.17
Six5P70178 AC156016.1-201ENSMUST00000227190 1035 ntBASIC16.09■□□□□ 0.17
Six5P70178 Scamp3-201ENSMUST00000029684 1489 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Clasp2-204ENSMUST00000213663 2727 ntTSL 5 BASIC16.09■□□□□ 0.17
Six5P70178 Srrm2-209ENSMUST00000190686 8864 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Six5P70178 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Six5P70178 Gm6093-201ENSMUST00000221792 1623 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Six5P70178 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
Six5P70178 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Gm26858-201ENSMUST00000180608 2040 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Clta-203ENSMUST00000107847 1121 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Gm13181-201ENSMUST00000120117 1069 ntBASIC16.08■□□□□ 0.16
Six5P70178 Gm17098-201ENSMUST00000166507 628 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Mir5122-201ENSMUST00000175004 89 ntBASIC16.08■□□□□ 0.16
Six5P70178 Dleu2-210ENSMUST00000183054 722 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC16.08■□□□□ 0.16
Six5P70178 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Necab3-202ENSMUST00000109716 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Six5P70178 Gm37194-201ENSMUST00000193092 3031 ntBASIC16.08■□□□□ 0.16
Six5P70178 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Six5P70178 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC16.07■□□□□ 0.16
Six5P70178 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC16.07■□□□□ 0.16
Six5P70178 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Gm8909-202ENSMUST00000097335 1182 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Six5P70178 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Trap1-201ENSMUST00000006137 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Gm43702-201ENSMUST00000198772 2546 ntBASIC16.07■□□□□ 0.16
Six5P70178 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Chst1-201ENSMUST00000065797 2680 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Six5P70178 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
Six5P70178 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Six5P70178 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Sfrp2-201ENSMUST00000029625 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Sharpin-201ENSMUST00000023211 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Stx18-201ENSMUST00000031008 1471 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Six5P70178 Gm3375-201ENSMUST00000203929 796 ntBASIC16.06■□□□□ 0.16
Six5P70178 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC16.06■□□□□ 0.16
Six5P70178 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms