Protein–RNA interactions for Protein: P62046

Lrch1, Leucine-rich repeat and calponin homology domain-containing protein 1, mousemouse

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrch1P62046 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Qrich1-206ENSMUST00000193258 2291 ntTSL 2 BASIC20.25■□□□□ 0.83
Lrch1P62046 Lingo1-203ENSMUST00000114256 2782 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Fmnl2-204ENSMUST00000127122 5508 ntTSL 5 BASIC20.25■□□□□ 0.83
Lrch1P62046 Cbx6-203ENSMUST00000109627 5806 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
Lrch1P62046 Gab1-201ENSMUST00000034150 4870 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Ap1s1-201ENSMUST00000111080 1353 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
Lrch1P62046 Tmem185a-201ENSMUST00000101506 2429 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC20.24■□□□□ 0.83
Lrch1P62046 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Vsig2-201ENSMUST00000002008 1166 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Gm6296-201ENSMUST00000222599 943 ntBASIC20.24■□□□□ 0.83
Lrch1P62046 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC20.24■□□□□ 0.83
Lrch1P62046 Grb14-201ENSMUST00000028252 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Lrch1P62046 Trim71-201ENSMUST00000111816 9332 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
Lrch1P62046 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Bend7-204ENSMUST00000184139 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC20.23■□□□□ 0.83
Lrch1P62046 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC20.23■□□□□ 0.83
Lrch1P62046 Mir5131-201ENSMUST00000175426 93 ntBASIC20.23■□□□□ 0.83
Lrch1P62046 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC20.23■□□□□ 0.83
Lrch1P62046 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC20.23■□□□□ 0.83
Lrch1P62046 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Tmem128-201ENSMUST00000087511 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Gm11747-201ENSMUST00000142751 1648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Rapgef1-203ENSMUST00000102872 6402 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Lrch1P62046 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Sco1-202ENSMUST00000108690 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Lrch1P62046 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC20.22■□□□□ 0.83
Lrch1P62046 Gm11594-201ENSMUST00000122313 162 ntBASIC20.22■□□□□ 0.83
Lrch1P62046 Gm6376-201ENSMUST00000209407 580 ntBASIC20.22■□□□□ 0.83
Lrch1P62046 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Adpgk-201ENSMUST00000026266 2464 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lrch1P62046 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Lrch1P62046 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Plekhm2-201ENSMUST00000030751 4154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Lrch1P62046 Pxdc1-202ENSMUST00000053459 2684 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Lrch1P62046 Mark2-206ENSMUST00000164205 3104 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Gm37374-201ENSMUST00000194954 1829 ntBASIC20.21■□□□□ 0.83
Lrch1P62046 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Mir8112-201ENSMUST00000184382 131 ntBASIC20.21■□□□□ 0.83
Lrch1P62046 Gm43332-201ENSMUST00000202511 1044 ntBASIC20.21■□□□□ 0.83
Lrch1P62046 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC20.21■□□□□ 0.83
Lrch1P62046 Rnf146-203ENSMUST00000160372 1948 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.21■□□□□ 0.83
Lrch1P62046 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Lrch1P62046 Spg7-209ENSMUST00000149248 2896 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.83
Lrch1P62046 Dll3-201ENSMUST00000108315 2618 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Trmt61a-201ENSMUST00000084947 2433 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC20.2■□□□□ 0.82
Lrch1P62046 Gm13186-201ENSMUST00000118031 316 ntBASIC20.2■□□□□ 0.82
Lrch1P62046 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC20.2■□□□□ 0.82
Lrch1P62046 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Lrch1P62046 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Tnpo2-207ENSMUST00000211601 2941 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Lrch1P62046 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Mmd-202ENSMUST00000107887 1654 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 AC153794.1-201ENSMUST00000169148 126 ntBASIC20.19■□□□□ 0.82
Lrch1P62046 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Gm43272-201ENSMUST00000200599 1584 ntBASIC20.19■□□□□ 0.82
Lrch1P62046 Noxa1-201ENSMUST00000044018 1617 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Exoc5-206ENSMUST00000161504 2582 ntTSL 5 BASIC20.19■□□□□ 0.82
Lrch1P62046 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Lrch1P62046 Eif4h-205ENSMUST00000202622 2726 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms