Protein–RNA interactions for Protein: P56726

Smo, Smoothened homolog, mousemouse

Predictions only

Length 793 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SmoP56726 Srf-201ENSMUST00000015749 4093 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Ssx2ip-204ENSMUST00000106153 3446 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
SmoP56726 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
SmoP56726 Osbpl1a-203ENSMUST00000118313 2893 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Ccdc17-201ENSMUST00000051869 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
SmoP56726 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SmoP56726 Ccnd3-202ENSMUST00000171031 2113 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
SmoP56726 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
SmoP56726 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Rpl39l-201ENSMUST00000044103 805 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Agbl5-215ENSMUST00000202060 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
SmoP56726 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Ffar3-201ENSMUST00000094583 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
SmoP56726 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Zfpm1-201ENSMUST00000054052 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Cdc14b-201ENSMUST00000039318 5859 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 AA467197-202ENSMUST00000110512 751 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 AC134329.2-201ENSMUST00000217897 428 ntBASIC17.29■□□□□ 0.36
SmoP56726 Gm21974-201ENSMUST00000126662 2037 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
SmoP56726 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
SmoP56726 Aifm1-201ENSMUST00000037349 2237 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
SmoP56726 Ptgfrn-201ENSMUST00000102694 5902 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
SmoP56726 Vpreb1-201ENSMUST00000075017 766 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Ccser1-203ENSMUST00000126214 5657 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
SmoP56726 Ppp2ca-201ENSMUST00000020608 7102 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Mxi1-201ENSMUST00000003870 5156 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC17.28■□□□□ 0.36
SmoP56726 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
SmoP56726 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Cspg5-205ENSMUST00000199736 2107 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Tm4sf19-201ENSMUST00000115149 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Cyp4f41-ps-201ENSMUST00000126790 1077 ntBASIC17.27■□□□□ 0.36
SmoP56726 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
SmoP56726 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Gm22697-201ENSMUST00000175194 63 ntBASIC17.27■□□□□ 0.36
SmoP56726 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 AC122335.2-201ENSMUST00000213901 6181 ntBASIC17.27■□□□□ 0.36
SmoP56726 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Sgta-201ENSMUST00000005067 1969 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SmoP56726 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SmoP56726 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SmoP56726 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SmoP56726 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Sfrp4-201ENSMUST00000002883 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Gm10013-201ENSMUST00000106074 672 ntBASIC17.26■□□□□ 0.35
SmoP56726 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC17.26■□□□□ 0.35
SmoP56726 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC17.26■□□□□ 0.35
SmoP56726 Gm6659-201ENSMUST00000174752 547 ntBASIC17.26■□□□□ 0.35
SmoP56726 Lamtor5-202ENSMUST00000199317 743 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Gm18101-201ENSMUST00000215769 548 ntBASIC17.26■□□□□ 0.35
SmoP56726 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SmoP56726 Lce1h-201ENSMUST00000051521 706 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Anapc5-218ENSMUST00000200645 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SmoP56726 Ddx41-201ENSMUST00000021956 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SmoP56726 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC17.25■□□□□ 0.35
SmoP56726 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
SmoP56726 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SmoP56726 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SmoP56726 Mir1668-201ENSMUST00000184114 107 ntBASIC17.25■□□□□ 0.35
SmoP56726 Gm7213-201ENSMUST00000215977 950 ntBASIC17.25■□□□□ 0.35
SmoP56726 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SmoP56726 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms