Protein–RNA interactions for Protein: P56371

Rab4a, Ras-related protein Rab-4A, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab4aP56371 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Ehmt2-204ENSMUST00000114033 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Rab4aP56371 Gne-202ENSMUST00000102936 2920 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab4aP56371 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab4aP56371 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Tmem121-201ENSMUST00000058491 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Adam15-202ENSMUST00000074582 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Krtap5-2-202ENSMUST00000190456 1471 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Rab4aP56371 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab4aP56371 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC13.63□□□□□ -0.23
Rab4aP56371 Cbx1-201ENSMUST00000018810 1824 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Clta-204ENSMUST00000107849 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Clta-205ENSMUST00000107851 1135 ntAPPRIS P4 TSL 2 BASIC13.63□□□□□ -0.23
Rab4aP56371 Ppp1r18os-201ENSMUST00000145804 784 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Rab4aP56371 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC13.63□□□□□ -0.23
Rab4aP56371 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Rhod-201ENSMUST00000048197 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Rhno1-203ENSMUST00000112152 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Rab4aP56371 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Epha10-201ENSMUST00000059343 2544 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Rchy1-201ENSMUST00000031345 1967 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Tmem150b-202ENSMUST00000086364 2822 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Rab4aP56371 Gm8770-201ENSMUST00000121113 1109 ntBASIC13.62□□□□□ -0.23
Rab4aP56371 Gm43759-201ENSMUST00000196925 1261 ntBASIC13.62□□□□□ -0.23
Rab4aP56371 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Spi1-201ENSMUST00000002180 2034 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Gm28523-201ENSMUST00000190040 1588 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Rab4aP56371 Aire-203ENSMUST00000105396 1749 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Aire-214ENSMUST00000154374 1712 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Aire-215ENSMUST00000155021 1737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Psmd11-214ENSMUST00000173938 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Fam178b-201ENSMUST00000114981 1659 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 4930519P11Rik-201ENSMUST00000181369 501 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Rab4aP56371 Sin3b-203ENSMUST00000212095 1257 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Gm16054-201ENSMUST00000139469 1819 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Lsp1-202ENSMUST00000038946 1828 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
Rab4aP56371 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 3010003L21Rik-201ENSMUST00000047953 1729 ntTSL 5 BASIC13.61□□□□□ -0.23
Rab4aP56371 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Eral1-201ENSMUST00000021183 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Rab4aP56371 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
Rab4aP56371 Gfer-201ENSMUST00000046839 1775 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 D11Wsu47e-202ENSMUST00000106621 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab4aP56371 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Prdm12-201ENSMUST00000113470 2471 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab4aP56371 Fam98c-209ENSMUST00000164589 1293 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Rab4aP56371 Zdhhc2-201ENSMUST00000049389 3381 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Bloc1s4-201ENSMUST00000071949 1273 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Rab4aP56371 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
Rab4aP56371 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 AC153526.5-201ENSMUST00000218661 2147 ntBASIC13.6□□□□□ -0.23
Rab4aP56371 Matk-205ENSMUST00000121205 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Pgk1-201ENSMUST00000081593 1825 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Rab4aP56371 Gm45212-201ENSMUST00000205831 3403 ntBASIC13.6□□□□□ -0.23
Rab4aP56371 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Rab4aP56371 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Rab4aP56371 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Rab4aP56371 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms